#111851 Report by node Jochens-MBP covering 1968 tests from 49 modules resulted into 5 errors

Report

ObsPy version
1.2.2
Continuous Integration
-
GitHub Pull Request
-
Report file
XML document
Total runtime
208.4 sec
Report date/time
2020-09-01 13:13:03

System / Python

Architecture
64bit
Machine
x86_64
Node
Jochens-MBP
Processor
i386
Python Compiler
Clang 10.0.1
Python Implementation
CPython
Python Version
3.8.5
Release
19.6.0
System
Darwin
Version
Darwin Kernel Version 19.6.0: Thu Jun 18 20:49:00 PDT 2020; root:xnu-6153.141.1~1/RELEASE_X86_64

Dependencies

cartopy
0.18.0
decorator
4.4.2
flake8
---
future
0.18.2
geographiclib
---
lxml.etree
4.5.2
m2crypto
---
matplotlib
3.3.0
mock
---
mpl_toolkits.basemap
---
numpy
1.19.1
pep8-naming
---
pyflakes
---
pyimgur
---
pyproj
2.6.1.post1
requests
2.24.0
scipy
1.5.2
setuptools
49.4.0.post20200813
shapefile
2.1.0
sqlalchemy
1.3.18

Modules (49)

Module Errors / Failures Tracebacks
obspy.clients.arclink Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn Not tested -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core 4 1 2 3 4
obspy.db - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc 1 5
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 5 5

Tracebacks (5)

Traceback (most recent call last):
File "/opt/anaconda3/envs/obspy/lib/python3.8/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.trace.Trace.times
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/core/trace.py", line 2487, in times
----------------------------------------------------------------------
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/core/trace.py", line 2529, in obspy.core.trace.Trace.times
Failed example:
tr.times("matplotlib")
Expected:
array([ 733643.01392361, 733643.01392373, 733643.01392384, ...,
733643.01427049, 733643.0142706 , 733643.01427072])
Got:
array([ 14480.01392361, 14480.01392373, 14480.01392384, ...,
14480.01427049, 14480.0142706 , 14480.01427072])
Traceback (most recent call last):
File "/opt/anaconda3/envs/obspy/lib/python3.8/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.utcdatetime.UTCDateTime.matplotlib_date
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/core/utcdatetime.py", line unknown line number, in matplotlib_date
----------------------------------------------------------------------
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/core/utcdatetime.py", line ?, in obspy.core.utcdatetime.UTCDateTime.matplotlib_date
Failed example:
t.matplotlib_date
Expected:
733643.0139780092
Got:
14480.01397800926
Traceback (most recent call last):
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/core/tests/test_utcdatetime.py", line 1092, in test_matplotlib_date
np.testing.assert_almost_equal(
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 595, in assert_almost_equal
raise AssertionError(_build_err_msg())
AssertionError:
Arrays are not almost equal to 8 decimals
ACTUAL: 5965.5723676839116
DESIRED: 725128.5723676839
Traceback (most recent call last):
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/core/tests/test_trace.py", line 1448, in test_times
np.testing.assert_allclose(got[:5], expected, rtol=1e-17)
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 1527, in assert_allclose
assert_array_compare(compare, actual, desired, err_msg=str(err_msg),
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 840, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Not equal to tolerance rtol=1e-17, atol=0
Mismatched elements: 5 / 5 (100%)
Max absolute difference: 719163.0
Max relative difference: 0.9849928778830878
x: array([ 10957. , 10957.000001, 10957.000001, 10957.000002,
10957.000002])
y: array([ 730120. , 730120.000001, 730120.000001, 730120.000002,
730120.000002])
Traceback (most recent call last):
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/io/nlloc/tests/test_util.py", line 55, in test_read_nlloc_scatter_coordinate_conversion
got = read_nlloc_scatter(
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/io/nlloc/util.py", line 53, in read_nlloc_scatter
data["x"], data["y"], data["z"] = coordinate_converter(
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/obspy/io/nlloc/tests/test_util.py", line 24, in _coordinate_conversion
x, y = pyproj.transform(proj_gk4, proj_wgs84, x * 1e3, y * 1e3)
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/pyproj/transformer.py", line 759, in transform
return Transformer.from_proj(
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/pyproj/transformer.py", line 265, in from_proj
return Transformer.from_crs(
File "/opt/anaconda3/envs/obspy/lib/python3.8/site-packages/pyproj/transformer.py", line 310, in from_crs
_Transformer.from_crs(
File "pyproj/_transformer.pyx", line 319, in pyproj._transformer._Transformer.from_crs
pyproj.exceptions.ProjError: Error creating Transformer from CRS.: (Internal Proj Error: proj_create_operations: SQLite error on SELECT source_crs_auth_name, source_crs_code, target_crs_auth_name, target_crs_code, cov.auth_name, cov.code, cov.table_name, area.south_lat, area.west_lon, area.north_lat, area.east_lon, ss.replacement_auth_name, ss.replacement_code FROM coordinate_operation_view cov JOIN area ON cov.area_of_use_auth_name = area.auth_name AND cov.area_of_use_code = area.code LEFT JOIN supersession ss ON ss.superseded_table_name = cov.table_name AND ss.superseded_auth_name = cov.auth_name AND ss.superseded_code = cov.code AND ss.superseded_table_name = ss.replacement_table_name AND ss.same_source_target_crs = 1 WHERE ((source_crs_auth_name = ? AND source_crs_code = ? AND target_crs_auth_name = ? AND target_crs_code = ?) OR (source_crs_auth_name = ? AND source_crs_code = ? AND target_crs_auth_name = ? AND target_crs_code = ?)) AND cov.deprecated = 0 AND cov.auth_name = ? ORDER BY pseudo_area_from_swne(south_lat, west_lon, north_lat, east_lon) DESC, (CASE WHEN accuracy is NULL THEN 1 ELSE 0 END), accuracy: no such column: ss.same_source_target_crs)

Skipped tests (28)

Submodule Test Skip message
core test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_plot_catalog_before_1900 (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) basemap not installed
core test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_location_plot_local (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_location_plot_ortho (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) No code formatting tests for release builds
core test_use_obspy_deprecation_warning (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) No code formatting tests for release builds
core test_future_imports_in_every_file (obspy.core.tests.test_code_formatting.FutureUsageTestCase) No code formatting tests for release builds
core test_no_pyplot_import_in_any_file (obspy.core.tests.test_code_formatting.MatplotlibBackendUsageTestCase) No code formatting tests for release builds
geodetics test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
geodetics test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
imaging test_script_plot (obspy.imaging.tests.test_mopad_script.MopadTestCase) Currently broken until further review.
signal test_schema_validation (obspy.signal.tests.test_quality_control.QualityControlTestCase) Test requires the jsonschema module
signal test_ppsd_spectrogram_plot (obspy.signal.tests.test_spectral_estimation.PsdTestCase) matplotlib >= 3 shifts labels
taup test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) test needs geographiclib >= 1.34
taup test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) Module geographiclib is not installed
taup test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34

Slowest tests (20)

Runtime Test
27.455s test_plot_wiggles_vertical_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
25.416s test_plot_wiggles_horizontal_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
24.636s test_plot_wiggles_negative_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
4.723s test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase)
4.281s __init__ (obspy.taup)
3.300s test_plot_multiple_traces (obspy.imaging.tests.test_waveform.WaveformTestCase)
3.026s test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
2.950s read (obspy.core.stream)
2.667s test_ppsd_restricted_stacks (obspy.signal.tests.test_spectral_estimation.PsdTestCase)
2.178s test_relcal_different_overlaps (obspy.signal.tests.test_calibration.CalibrationTestCase)
1.946s test_location_plot_local (obspy.core.tests.test_inventory.InventoryCartopyTestCase)
1.904s plot_travel_times (obspy.taup.tau)
1.882s test_regional_models (obspy.taup.tests.test_tau.TauPyModelTestCase)
1.833s test_remove_response_plot (obspy.core.tests.test_trace.TraceTestCase)
1.783s test_correlate_stream_template_and_correlation_detector (obspy.signal.tests.test_cross_correlation.CrossCorrelationTestCase)
1.774s test_location_plot_local (obspy.core.tests.test_network.NetworkCartopyTestCase)
1.721s test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase)
1.678s test_polarization_vidale (obspy.signal.tests.test_polarization.PolarizationTestCase)
1.617s test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase)
1.571s test_many_identically_named_phases (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)