#111856 Report by node gh-actions covering 1902 tests from 50 modules resulted into 10 errors

Report

ObsPy version
1.2.2.post0+178.g3099559079
Continuous Integration
https://github.com/obspy/obspy/actions/runs/235853541
GitHub Pull Request
https://github.com/obspy/obspy/pull/2709
Report file
XML document
Total runtime
201.4 sec
Report date/time
2020-09-02 05:15:19

System / Python

Architecture
64bit
Machine
x86_64
Node
gh-actions
Processor
x86_64
Python Compiler
GCC 7.5.0
Python Implementation
CPython
Python Version
3.8.5
Release
5.3.0-1035-azure
System
Linux
Version
#36-Ubuntu SMP Thu Aug 6 09:21:33 UTC 2020

Dependencies

cartopy
---
decorator
4.4.2
flake8
---
geographiclib
---
lxml.etree
4.5.2
m2crypto
---
matplotlib
3.3.1
mock
4.0.2
mpl_toolkits.basemap
---
numpy
1.19.1
pep8-naming
---
pyflakes
---
pyimgur
0.6.0
pyproj
1.9.6
requests
2.24.0
scipy
1.5.2
setuptools
49.6.0.post20200814
shapefile
2.1.0
sqlalchemy
1.3.19

Modules (50)

Module Errors / Failures Tracebacks
obspy.clients.arclink Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn Not tested -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core 7 1 2 3 4 5 6 7
obspy.db - -
obspy.geodetics - -
obspy.imaging 1 8
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.hyposat 2 9 10
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 10 10

Tracebacks (10)

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/core/tests/test_network.py", line 374, in test_location_plot_local
net.plot(method='basemap', projection='local', resolution='l',
File "/home/runner/work/obspy/obspy/obspy/core/inventory/network.py", line 603, in plot
from obspy.imaging.maps import plot_map
File "/home/runner/work/obspy/obspy/obspy/imaging/maps.py", line 28, in <module>
from mpl_toolkits.basemap import Basemap
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/mpl_toolkits/basemap/__init__.py", line 50, in <module>
from .proj import Proj
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/mpl_toolkits/basemap/proj.py", line 6, in <module>
from matplotlib.cbook import dedent
ImportError: cannot import name 'dedent' from 'matplotlib.cbook' (/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/matplotlib/cbook/__init__.py)
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/core/tests/test_network.py", line 354, in test_location_plot_ortho
net.plot(method='basemap', projection='ortho', resolution='c',
File "/home/runner/work/obspy/obspy/obspy/core/inventory/network.py", line 603, in plot
from obspy.imaging.maps import plot_map
File "/home/runner/work/obspy/obspy/obspy/imaging/maps.py", line 28, in <module>
from mpl_toolkits.basemap import Basemap
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/mpl_toolkits/basemap/__init__.py", line 50, in <module>
from .proj import Proj
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/mpl_toolkits/basemap/proj.py", line 6, in <module>
from matplotlib.cbook import dedent
ImportError: cannot import name 'dedent' from 'matplotlib.cbook' (/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/matplotlib/cbook/__init__.py)
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.utcdatetime.UTCDateTime.matplotlib_date
File "/home/runner/work/obspy/obspy/obspy/core/utcdatetime.py", line unknown line number, in matplotlib_date
----------------------------------------------------------------------
File "/home/runner/work/obspy/obspy/obspy/core/utcdatetime.py", line ?, in obspy.core.utcdatetime.UTCDateTime.matplotlib_date
Failed example:
t.matplotlib_date
Expected:
733643.0139780092
Got:
14480.01397800926
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.trace.Trace.times
File "/home/runner/work/obspy/obspy/obspy/core/trace.py", line 2494, in times
----------------------------------------------------------------------
File "/home/runner/work/obspy/obspy/obspy/core/trace.py", line 2536, in obspy.core.trace.Trace.times
Failed example:
tr.times("matplotlib")
Expected:
array([ 733643.01392361, 733643.01392373, 733643.01392384, ...,
733643.01427049, 733643.0142706 , 733643.01427072])
Got:
array([ 14480.01392361, 14480.01392373, 14480.01392384, ...,
14480.01427049, 14480.0142706 , 14480.01427072])
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.util.base.make_format_plugin_table
File "/home/runner/work/obspy/obspy/obspy/core/util/base.py", line 470, in make_format_plugin_table
----------------------------------------------------------------------
File "/home/runner/work/obspy/obspy/obspy/core/util/base.py", line 476, in obspy.core.util.base.make_format_plugin_table
Failed example:
print(table) # doctest: +NORMALIZE_WHITESPACE +ELLIPSIS
Expected:
======... ===========... ========================================...
Format Used Module _`Linked Function Call`
======... ===========... ========================================...
CMTSOLUTION :mod:`...io.cmtsolution` :func:`..._write_cmtsolution`
CNV :mod:`...io.cnv` :func:`obspy.io.cnv.core._write_cnv`
HYPODDPHA :mod:`...io.hypodd` :func:`obspy.io.hypodd.pha._write_pha`
JSON :mod:`...io.json` :func:`obspy.io.json.core._write_json`
KML :mod:`obspy.io.kml` :func:`obspy.io.kml.core._write_kml`
NLLOC_OBS :mod:`...io.nlloc` :func:`obspy.io.nlloc.core.write_nlloc_obs`
NORDIC :mod:`obspy.io.nordic` :func:`obspy.io.nordic.core.write_select`
QUAKEML :mod:`...io.quakeml` :func:`obspy.io.quakeml.core._write_quakeml`
SC3ML :mod:`...io.seiscomp` :func:`obspy.io.seiscomp.event._write_sc3ml`
SCARDEC :mod:`obspy.io.scardec`
:func:`obspy.io.scardec.core._write_scardec`
SHAPEFILE :mod:`obspy.io.shapefile`
:func:`obspy.io.shapefile.core._write_shapefile`
ZMAP :mod:`...io.zmap` :func:`obspy.io.zmap.core._write_zmap`
======... ===========... ========================================...
Got:
============== =========================== ====================================================
Format Used Module _`Linked Function Call`
============== =========================== ====================================================
CMTSOLUTION :mod:`obspy.io.cmtsolution` :func:`obspy.io.cmtsolution.core._write_cmtsolution`
CNV :mod:`obspy.io.cnv` :func:`obspy.io.cnv.core._write_cnv`
HYPODDPHA :mod:`obspy.io.hypodd` :func:`obspy.io.hypodd.pha._write_pha`
HYPOSAT_PHASES :mod:`obspy.io.hyposat` :func:`obspy.io.hyposat.core._write_hyposat_phases`
JSON :mod:`obspy.io.json` :func:`obspy.io.json.core._write_json`
KML :mod:`obspy.io.kml` :func:`obspy.io.kml.core._write_kml`
NLLOC_OBS :mod:`obspy.io.nlloc` :func:`obspy.io.nlloc.core.write_nlloc_obs`
NORDIC :mod:`obspy.io.nordic` :func:`obspy.io.nordic.core.write_select`
QUAKEML :mod:`obspy.io.quakeml` :func:`obspy.io.quakeml.core._write_quakeml`
SC3ML :mod:`obspy.io.seiscomp` :func:`obspy.io.seiscomp.event._write_sc3ml`
SCARDEC :mod:`obspy.io.scardec` :func:`obspy.io.scardec.core._write_scardec`
SHAPEFILE :mod:`obspy.io.shapefile` :func:`obspy.io.shapefile.core._write_shapefile`
ZMAP :mod:`obspy.io.zmap` :func:`obspy.io.zmap.core._write_zmap`
============== =========================== ====================================================
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/core/tests/test_trace.py", line 1444, in test_times
np.testing.assert_allclose(got[:5], expected, rtol=1e-17)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 1527, in assert_allclose
assert_array_compare(compare, actual, desired, err_msg=str(err_msg),
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 840, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Not equal to tolerance rtol=1e-17, atol=0
Mismatched elements: 5 / 5 (100%)
Max absolute difference: 719163.0
Max relative difference: 0.9849928778830878
x: array([ 10957. , 10957.000001, 10957.000001, 10957.000002,
10957.000002])
y: array([ 730120. , 730120.000001, 730120.000001, 730120.000002,
730120.000002])
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/core/tests/test_utcdatetime.py", line 1086, in test_matplotlib_date
np.testing.assert_almost_equal(
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 595, in assert_almost_equal
raise AssertionError(_build_err_msg())
AssertionError:
Arrays are not almost equal to 8 decimals
ACTUAL: 5965.5723676839116
DESIRED: 725128.5723676839
>>> Cannot import test suite for module obspy.imaging due to:
-------------------------------------------------------------
File "/usr/share/miniconda3/envs/test/bin/coverage", line 11, in <module>
sys.exit(main())
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/coverage/cmdline.py", line 865, in main
status = CoverageScript().command_line(argv)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/coverage/cmdline.py", line 582, in command_line
return self.do_run(options, args)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/coverage/cmdline.py", line 740, in do_run
runner.run()
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/coverage/execfile.py", line 247, in run
exec(code, main_mod.__dict__)
File "/home/runner/work/obspy/obspy/obspy/scripts/runtests.py", line 752, in <module>
errors = run(interactive=False)
File "/home/runner/work/obspy/obspy/obspy/scripts/runtests.py", line 706, in run
return run_tests(verbosity, args.tests, report, args.log, args.server,
File "/home/runner/work/obspy/obspy/obspy/scripts/runtests.py", line 537, in run_tests
suites, status, import_failures = _get_suites(verbosity, tests)
File "/home/runner/work/obspy/obspy/obspy/scripts/runtests.py", line 161, in _get_suites
suite.append(ut.loadTestsFromName(test, None))
File "/usr/share/miniconda3/envs/test/lib/python3.8/unittest/loader.py", line 205, in loadTestsFromName
test = obj()
File "/home/runner/work/obspy/obspy/obspy/imaging/tests/__init__.py", line 19, in suite
add_doctests(suite, MODULE_NAME)
File "/home/runner/work/obspy/obspy/obspy/core/util/testing.py", line 114, in add_doctests
_module = __import__(_module_name,
File "/home/runner/work/obspy/obspy/obspy/imaging/maps.py", line 28, in <module>
from mpl_toolkits.basemap import Basemap
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/mpl_toolkits/basemap/__init__.py", line 50, in <module>
from .proj import Proj
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/mpl_toolkits/basemap/proj.py", line 6, in <module>
from matplotlib.cbook import dedent
ImportError: cannot import name 'dedent' from 'matplotlib.cbook' (/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/matplotlib/cbook/__init__.py)
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.io.hyposat.__init__
File "/home/runner/work/obspy/obspy/obspy/io/hyposat/__init__.py", line 1, in __init__
----------------------------------------------------------------------
File "/home/runner/work/obspy/obspy/obspy/io/hyposat/__init__.py", line 24, in obspy.io.hyposat.__init__
Failed example:
print(cat)
Expected:
2 Event(s) in Catalog:
2025-05-14T14:35:35.510000Z | +40.225, +10.450 | 3.5 None
2025-05-14T15:43:05.280000Z | +40.223, +10.450 | 1.8 None
Got:
1 Event(s) in Catalog:
2006-07-15T17:21:20.195670Z | +51.658, +7.737
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/io/hyposat/tests/test_core.py", line 91, in test_write_hyposat
self.assertEqual(got, expected)
AssertionError: b'smi[1115 chars] 0.050' != b'smi[1115 chars] 0.050\n'

Skipped tests (31)

Submodule Test Skip message
core test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) Formatting tests require at least flake8 3.0.
core test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryCartopyTestCase) cartopy not installed
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryCartopyTestCase) cartopy not installed
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryCartopyTestCase) cartopy not installed
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_plot_catalog_before_1900 (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) unsupported proj4 library
core test_location_plot_global (obspy.core.tests.test_network.NetworkCartopyTestCase) cartopy not installed
core test_location_plot_local (obspy.core.tests.test_network.NetworkCartopyTestCase) cartopy not installed
core test_location_plot_ortho (obspy.core.tests.test_network.NetworkCartopyTestCase) cartopy not installed
geodetics test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
geodetics test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
signal test_ppsd_spectrogram_plot (obspy.signal.tests.test_spectral_estimation.PsdTestCase) matplotlib >= 3 shifts labels
taup test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) test needs geographiclib >= 1.34
taup test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) Module geographiclib is not installed
taup test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime Test
11.347s test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase)
9.973s __init__ (obspy.taup)
7.651s test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
7.185s test_ppsd_restricted_stacks (obspy.signal.tests.test_spectral_estimation.PsdTestCase)
5.613s test_relcal_different_overlaps (obspy.signal.tests.test_calibration.CalibrationTestCase)
4.570s plot_travel_times (obspy.taup.tau)
4.184s test_regional_models (obspy.taup.tests.test_tau.TauPyModelTestCase)
4.105s test_remove_response_plot (obspy.core.tests.test_trace.TraceTestCase)
4.082s test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase)
3.780s test_polarization_vidale (obspy.signal.tests.test_polarization.PolarizationTestCase)
3.198s test_many_identically_named_phases (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
3.055s test_correlate_stream_template_and_correlation_detector (obspy.signal.tests.test_cross_correlation.CrossCorrelationTestCase)
2.975s test_auto_read_arclink_xml (obspy.io.arclink.tests.test_inventory_xml.ArclinkInventoryTestCase)
2.380s test_rotate2zne_against_lqt_different_combinations (obspy.signal.tests.test_rotate.RotateTestCase)
2.268s test_plot_tf_misfits (obspy.signal.tests.test_tf_misfit.TfPlotTestCase)
2.136s test_plot_tf_gofs (obspy.signal.tests.test_tf_misfit.TfPlotTestCase)
1.972s test_plot_travel_times_convenience (obspy.taup.tests.test_plotting.TauPyPlottingTestCase)
1.960s test_evalresp_file_like_object (obspy.signal.tests.test_invsim.InvSimTestCase)
1.881s read (obspy.core.stream)
1.814s test_spherical_many_phases (obspy.taup.tests.test_plotting.TauPyPlottingTestCase)