#112352 Report by node labex2 covering 1892 tests from 49 modules resulted into 8 errors
Report
- ObsPy version
- 1.2.2
- GitHub Pull Request
- -
- Report file
- XML document
- Total runtime
- 253.4 sec
- Report date/time
- Nov. 10, 2020, 4:49 a.m.
System / Python
- Architecture
- 64bit
- Machine
- x86_64
- Node
- labex2
- Processor
- x86_64
- Python Compiler
- GCC 7.3.0
- Python Implementation
- CPython
- Python Version
- 3.7.3
- Release
- 4.15.0-118-generic
- System
- Linux
- Version
- #119-Ubuntu SMP Tue Sep 8 12:30:01 UTC 2020
Dependencies
- cartopy
- ---
- decorator
- 4.4.2
- flake8
- ---
- future
- 0.18.2
- geographiclib
- ---
- lxml.etree
- 4.6.1
- m2crypto
- ---
- matplotlib
- 3.3.2
- mock
- 4.0.2
- mpl_toolkits.basemap
- ---
- numpy
- 1.19.4
- pep8-naming
- ---
- pyflakes
- ---
- pyimgur
- ---
- pyproj
- 1.9.6
- requests
- 2.24.0
- scipy
- 1.5.2
- setuptools
- 45.1.0.post20200119
- shapefile
- 2.1.0
- sqlalchemy
- 1.3.20
Modules (49)
Module | Errors / Failures | Tracebacks | ||||
---|---|---|---|---|---|---|
obspy.clients.arclink | Not tested | - | - | - | - | - |
obspy.clients.earthworm | Not tested | - | - | - | - | - |
obspy.clients.fdsn | Not tested | - | - | - | - | - |
obspy.clients.filesystem | - | 28 | 28 | - | 3.92s | - |
obspy.clients.iris | Not tested | - | - | - | - | - |
obspy.clients.neic | Not tested | - | - | - | - | - |
obspy.clients.nrl | Not tested | - | - | - | - | - |
obspy.clients.seedlink | Not tested | - | - | - | - | - |
obspy.clients.seishub | Not tested | - | - | - | - | - |
obspy.clients.syngine | Not tested | - | - | - | - | - |
obspy.core | 6 | 666 | 641 | 25 | 49.85s | 1 2 3 4 5 6 |
obspy.db | - | 9 | 9 | - | 0.11s | - |
obspy.geodetics | - | 20 | 18 | 2 | 0.22s | - |
obspy.imaging | 1 | 1 | 1 | - | 0.00s | 7 |
obspy.io.ah | - | 5 | 5 | - | 0.14s | - |
obspy.io.arclink | - | 5 | 5 | - | 2.76s | - |
obspy.io.ascii | - | 28 | 28 | - | 0.26s | - |
obspy.io.cmtsolution | - | 10 | 10 | - | 0.16s | - |
obspy.io.cnv | - | 1 | 1 | - | 0.04s | - |
obspy.io.css | - | 7 | 7 | - | 1.15s | - |
obspy.io.dmx | - | 5 | 5 | - | 0.04s | - |
obspy.io.focmec | - | 8 | 8 | - | 0.17s | - |
obspy.io.gcf | - | 9 | 9 | - | 0.04s | - |
obspy.io.gse2 | - | 55 | 55 | - | 0.67s | - |
obspy.io.hypodd | - | 6 | 6 | - | 0.25s | - |
obspy.io.iaspei | - | 7 | 7 | - | 1.32s | - |
obspy.io.json | - | 4 | 4 | - | 0.05s | - |
obspy.io.kinemetrics | - | 7 | 7 | - | 1.06s | - |
obspy.io.kml | - | 3 | 3 | - | 0.27s | - |
obspy.io.mseed | - | 127 | 127 | - | 2.71s | - |
obspy.io.ndk | - | 20 | 20 | - | 0.52s | - |
obspy.io.nied | - | 11 | 11 | - | 0.09s | - |
obspy.io.nlloc | 1 | 12 | 12 | - | 0.28s | 8 |
obspy.io.nordic | - | 51 | 51 | - | 2.50s | - |
obspy.io.pdas | - | 3 | 3 | - | 0.01s | - |
obspy.io.pde | - | 13 | 13 | - | 0.52s | - |
obspy.io.quakeml | - | 38 | 38 | - | 1.00s | - |
obspy.io.reftek | - | 20 | 20 | - | 0.27s | - |
obspy.io.rg16 | - | 36 | 36 | - | 0.36s | - |
obspy.io.sac | - | 96 | 96 | - | 0.75s | - |
obspy.io.scardec | - | 5 | 5 | - | 0.17s | - |
obspy.io.seg2 | - | 2 | 2 | - | 0.07s | - |
obspy.io.segy | - | 56 | 56 | - | 0.97s | - |
obspy.io.seisan | - | 8 | 8 | - | 0.17s | - |
obspy.io.seiscomp | - | 47 | 47 | - | 2.39s | - |
obspy.io.sh | - | 25 | 25 | - | 0.63s | - |
obspy.io.shapefile | - | 7 | 7 | - | 0.78s | - |
obspy.io.stationtxt | - | 11 | 11 | - | 0.15s | - |
obspy.io.stationxml | - | 22 | 22 | - | 0.84s | - |
obspy.io.wav | - | 8 | 8 | - | 0.04s | - |
obspy.io.win | - | 2 | 2 | - | 0.25s | - |
obspy.io.xseed | - | 82 | 82 | - | 13.01s | - |
obspy.io.y | - | 5 | 5 | - | 0.02s | - |
obspy.io.zmap | - | 14 | 14 | - | 0.35s | - |
obspy.realtime | - | 22 | 22 | - | 0.71s | - |
obspy.scripts | - | 2 | 2 | - | 0.02s | - |
obspy.signal | - | 199 | 198 | 1 | 73.52s | - |
obspy.taup | - | 64 | 58 | 6 | 87.84s | - |
Summary | 8 | 1892 | 1858 | 34 | 253.42s | 8 |
Tracebacks (8)
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/tests/test_network.py", line 386, in test_location_plot_local size=13**2, outfile=ic.name) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/inventory/network.py", line 609, in plot from obspy.imaging.maps import plot_map File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/imaging/maps.py", line 33, in <module> from mpl_toolkits.basemap import Basemap File "/home/damian/miniconda3/lib/python3.7/site-packages/mpl_toolkits/basemap/__init__.py", line 50, in <module> from .proj import Proj File "/home/damian/miniconda3/lib/python3.7/site-packages/mpl_toolkits/basemap/proj.py", line 6, in <module> from matplotlib.cbook import dedent ImportError: cannot import name 'dedent' from 'matplotlib.cbook' (/home/damian/miniconda3/lib/python3.7/site-packages/matplotlib/cbook/__init__.py)
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/tests/test_network.py", line 367, in test_location_plot_ortho color='yellow', label=False, outfile=ic.name) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/inventory/network.py", line 609, in plot from obspy.imaging.maps import plot_map File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/imaging/maps.py", line 33, in <module> from mpl_toolkits.basemap import Basemap File "/home/damian/miniconda3/lib/python3.7/site-packages/mpl_toolkits/basemap/__init__.py", line 50, in <module> from .proj import Proj File "/home/damian/miniconda3/lib/python3.7/site-packages/mpl_toolkits/basemap/proj.py", line 6, in <module> from matplotlib.cbook import dedent ImportError: cannot import name 'dedent' from 'matplotlib.cbook' (/home/damian/miniconda3/lib/python3.7/site-packages/matplotlib/cbook/__init__.py)
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/doctest.py", line 2196, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.utcdatetime.UTCDateTime.matplotlib_date File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/utcdatetime.py", line unknown line number, in matplotlib_date ---------------------------------------------------------------------- File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/utcdatetime.py", line ?, in obspy.core.utcdatetime.UTCDateTime.matplotlib_date Failed example: t.matplotlib_date Expected: 733643.0139780092 Got: 14480.01397800926
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/doctest.py", line 2196, in runTest raise self.failureException(self.format_failure(new.getvalue())) AssertionError: Failed doctest test for obspy.core.trace.Trace.times File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/trace.py", line 2487, in times ---------------------------------------------------------------------- File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/trace.py", line 2529, in obspy.core.trace.Trace.times Failed example: tr.times("matplotlib") Expected: array([ 733643.01392361, 733643.01392373, 733643.01392384, ..., 733643.01427049, 733643.0142706 , 733643.01427072]) Got: array([ 14480.01392361, 14480.01392373, 14480.01392384, ..., 14480.01427049, 14480.0142706 , 14480.01427072])
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/tests/test_trace.py", line 1448, in test_times np.testing.assert_allclose(got[:5], expected, rtol=1e-17) File "/home/damian/miniconda3/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 1528, in assert_allclose verbose=verbose, header=header, equal_nan=equal_nan) File "/home/damian/miniconda3/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 840, in assert_array_compare raise AssertionError(msg) AssertionError: Not equal to tolerance rtol=1e-17, atol=0 Mismatched elements: 5 / 5 (100%) Max absolute difference: 719163.0 Max relative difference: 0.9849928778830878 x: array([ 10957. , 10957.000001, 10957.000001, 10957.000002, 10957.000002]) y: array([ 730120. , 730120.000001, 730120.000001, 730120.000002, 730120.000002])
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/tests/test_utcdatetime.py", line 1093, in test_matplotlib_date t.matplotlib_date, expected, decimal=8) File "/home/damian/miniconda3/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 595, in assert_almost_equal raise AssertionError(_build_err_msg()) AssertionError: Arrays are not almost equal to 8 decimals ACTUAL: 5965.5723676839116 DESIRED: 725128.5723676839
>>> Cannot import test suite for module obspy.imaging due to: ------------------------------------------------------------- File "/home/damian/miniconda3/bin/obspy-runtests", line 10, in <module> sys.exit(main()) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/scripts/runtests.py", line 747, in main errors = run(argv, interactive) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/scripts/runtests.py", line 715, in run pr_url=args.pr_url) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/scripts/runtests.py", line 542, in run_tests suites, status, import_failures = _get_suites(verbosity, tests) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/scripts/runtests.py", line 164, in _get_suites suite.append(ut.loadTestsFromName(test, None)) File "/home/damian/miniconda3/lib/python3.7/unittest/loader.py", line 205, in loadTestsFromName test = obj() File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/imaging/tests/__init__.py", line 23, in suite add_doctests(suite, MODULE_NAME) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/core/util/testing.py", line 120, in add_doctests fromlist=[native_str("obspy")]) File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/imaging/maps.py", line 33, in <module> from mpl_toolkits.basemap import Basemap File "/home/damian/miniconda3/lib/python3.7/site-packages/mpl_toolkits/basemap/__init__.py", line 50, in <module> from .proj import Proj File "/home/damian/miniconda3/lib/python3.7/site-packages/mpl_toolkits/basemap/proj.py", line 6, in <module> from matplotlib.cbook import dedent ImportError: cannot import name 'dedent' from 'matplotlib.cbook' (/home/damian/miniconda3/lib/python3.7/site-packages/matplotlib/cbook/__init__.py)
Traceback (most recent call last): File "/home/damian/miniconda3/lib/python3.7/site-packages/obspy/io/nlloc/tests/test_util.py", line 60, in test_read_nlloc_scatter_coordinate_conversion np.testing.assert_allclose(got[field], expected[field], rtol=1e-5) File "/home/damian/miniconda3/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 1528, in assert_allclose verbose=verbose, header=header, equal_nan=equal_nan) File "/home/damian/miniconda3/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 840, in assert_array_compare raise AssertionError(msg) AssertionError: Not equal to tolerance rtol=1e-05, atol=0 Mismatched elements: 12 / 12 (100%) Max absolute difference: 0.00140380859375 Max relative difference: 0.00012006328324787319 x: array([ 11.693643, 11.692802, 11.693143, 11.69564 , 11.692195, 11.693854, 11.683114, 11.691299, 11.696191, 11.68159 , 11.69365 , 11.687802], dtype=float32) y: array([ 11.692239, 11.6914 , 11.69174 , 11.694236, 11.690792, 11.692451, 11.681713, 11.689898, 11.694788, 11.680189, 11.692247, 11.6864 ], dtype=float32)
Skipped tests (34)
Submodule | Test | Skip message |
---|---|---|
core | test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_location_plot_global (obspy.core.tests.test_inventory.InventoryCartopyTestCase) | cartopy not installed |
core | test_location_plot_local (obspy.core.tests.test_inventory.InventoryCartopyTestCase) | cartopy not installed |
core | test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryCartopyTestCase) | cartopy not installed |
core | test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_plot_catalog_before_1900 (obspy.core.tests.test_event.CatalogBasemapTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_catalog_plot_global (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
core | test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
core | test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
core | test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogCartopyTestCase) | Cartopy not installed or too old |
core | test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) | matplotlib 3.0.1 is not compatible with basemap |
core | test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) | unsupported proj4 library |
core | test_location_plot_global (obspy.core.tests.test_network.NetworkCartopyTestCase) | cartopy not installed |
core | test_location_plot_local (obspy.core.tests.test_network.NetworkCartopyTestCase) | cartopy not installed |
core | test_location_plot_ortho (obspy.core.tests.test_network.NetworkCartopyTestCase) | cartopy not installed |
core | test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) | No code formatting tests for release builds |
core | test_use_obspy_deprecation_warning (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) | No code formatting tests for release builds |
core | test_future_imports_in_every_file (obspy.core.tests.test_code_formatting.FutureUsageTestCase) | No code formatting tests for release builds |
core | test_no_pyplot_import_in_any_file (obspy.core.tests.test_code_formatting.MatplotlibBackendUsageTestCase) | No code formatting tests for release builds |
geodetics | test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) | Module geographiclib is not installed |
geodetics | test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) | Module geographiclib is not installed |
signal | test_ppsd_spectrogram_plot (obspy.signal.tests.test_spectral_estimation.PsdTestCase) | matplotlib >= 3 shifts labels |
taup | test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) | Module geographiclib is not installed or too old. |
taup | test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) | Module geographiclib is not installed or too old. |
taup | test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) | test needs geographiclib >= 1.34 |
taup | test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) | Module geographiclib is not installed |
taup | test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) | test needs geographiclib >= 1.34 |
taup | test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) | test needs geographiclib >= 1.34 |
Slowest tests (20)
Runtime | Test |
---|---|
13.318s | __init__ (obspy.taup) |
10.111s | test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase) |
9.754s | test_relcal_different_overlaps (obspy.signal.tests.test_calibration.CalibrationTestCase) |
9.364s | test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase) |
6.599s | test_trim_floating_point_with_padding_2 (obspy.core.tests.test_trace.TraceTestCase) |
6.309s | test_ppsd_restricted_stacks (obspy.signal.tests.test_spectral_estimation.PsdTestCase) |
6.139s | plot_travel_times (obspy.taup.tau) |
5.827s | test_regional_models (obspy.taup.tests.test_tau.TauPyModelTestCase) |
5.729s | test_polarization_vidale (obspy.signal.tests.test_polarization.PolarizationTestCase) |
5.371s | test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) |
4.638s | test_remove_response_plot (obspy.core.tests.test_trace.TraceTestCase) |
4.444s | test_many_identically_named_phases (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase) |
3.501s | test_correlate_stream_template_and_correlation_detector (obspy.signal.tests.test_cross_correlation.CrossCorrelationTestCase) |
3.266s | test_rotate2zne_against_lqt_different_combinations (obspy.signal.tests.test_rotate.RotateTestCase) |
3.191s | test_plot_tf_misfits (obspy.signal.tests.test_tf_misfit.TfPlotTestCase) |
2.978s | test_plot_tf_gofs (obspy.signal.tests.test_tf_misfit.TfPlotTestCase) |
2.749s | test_relcal_using_dict (obspy.signal.tests.test_calibration.CalibrationTestCase) |
2.748s | test_relcal_using_traces (obspy.signal.tests.test_calibration.CalibrationTestCase) |
2.687s | test_auto_read_arclink_xml (obspy.io.arclink.tests.test_inventory_xml.ArclinkInventoryTestCase) |
2.629s | test_evalresp_file_like_object (obspy.signal.tests.test_invsim.InvSimTestCase) |