#112437 Report by node gh-actions covering 1974 tests from 49 modules resulted into 5 errors

Report

ObsPy version
0.0.0.dev+0.g93f13a6318
Continuous Integration
https://github.com/obspy/obspy/actions/runs/372351827
GitHub Pull Request
https://github.com/obspy/obspy/pull/2752
Report file
XML document
Total runtime
243.4 sec
Report date/time
2020-11-19 07:34:16

System / Python

Architecture
64bit
Machine
x86_64
Node
gh-actions
Processor
x86_64
Python Compiler
GCC 7.5.0
Python Implementation
CPython
Python Version
3.7.8
Release
5.4.0-1031-azure
System
Linux
Version
#32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020

Dependencies

cartopy
---
decorator
4.4.2
flake8
---
geographiclib
---
lxml.etree
4.6.1
m2crypto
---
matplotlib
3.3.3
mock
4.0.2
mpl_toolkits.basemap
---
numpy
1.19.4
pep8-naming
---
pyflakes
---
pyimgur
0.6.0
pyproj
1.9.6
requests
2.25.0
scipy
1.5.3
setuptools
49.6.0.post20201009
shapefile
2.1.2
sqlalchemy
1.3.20

Modules (49)

Module Errors / Failures Tracebacks
obspy.clients.arclink Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn Not tested -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core - -
obspy.db - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal 5 1 2 3 4 5
obspy.taup - -
Summary 5 5

Tracebacks (5)

Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 902, in test_can_add_npz_without_pickle
ppsd.add_npz(temp_path, allow_pickle=True)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1458, in add_npz
self._add_npz(filename, allow_pickle=allow_pickle)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1469, in _add_npz
value_ = data[key].item()
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/npyio.py", line 255, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/format.py", line 727, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1406, in load_npz
data_ = data[key]
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/npyio.py", line 255, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/format.py", line 727, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 864, in test_can_read_npz_without_pickle
ppsd = PPSD.load_npz(self.example_ppsd_npz, allow_pickle=True)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1411, in load_npz
raise ValueError(msg)
ValueError: Loading PPSD results saved with ObsPy versions < 1.2 requires setting the allow_pickle parameter of PPSD.load_npz to True
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1406, in load_npz
data_ = data[key]
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/npyio.py", line 255, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/format.py", line 727, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 838, in test_exception_reading_newer_npz
ppsd = PPSD.load_npz(self.example_ppsd_npz, allow_pickle=True)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1411, in load_npz
raise ValueError(msg)
ValueError: Loading PPSD results saved with ObsPy versions < 1.2 requires setting the allow_pickle parameter of PPSD.load_npz to True
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1406, in load_npz
data_ = data[key]
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/npyio.py", line 255, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/format.py", line 727, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 742, in test_ppsd_temporal_plot
ppsd = PPSD.load_npz(self.example_ppsd_npz, allow_pickle=True)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1411, in load_npz
raise ValueError(msg)
ValueError: Loading PPSD results saved with ObsPy versions < 1.2 requires setting the allow_pickle parameter of PPSD.load_npz to True
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1406, in load_npz
data_ = data[key]
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/npyio.py", line 255, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.7/site-packages/numpy/lib/format.py", line 727, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/runner/work/obspy/obspy/obspy/signal/tests/test_spectral_estimation.py", line 350, in test_ppsd_w_iris_against_obspy_results
allow_pickle=True)
File "/home/runner/work/obspy/obspy/obspy/signal/spectral_estimation.py", line 1411, in load_npz
raise ValueError(msg)
ValueError: Loading PPSD results saved with ObsPy versions < 1.2 requires setting the allow_pickle parameter of PPSD.load_npz to True

Skipped tests (34)

Submodule Test Skip message
core test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) Formatting tests require at least flake8 3.0.
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_plot_catalog_before_1900 (obspy.core.tests.test_event.CatalogBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogCartopyTestCase) Cartopy not installed or too old
core test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) no or invalid basemap installation
core test_location_plot_local (obspy.core.tests.test_network.NetworkBasemapTestCase) no or invalid basemap installation
core test_location_plot_ortho (obspy.core.tests.test_network.NetworkBasemapTestCase) no or invalid basemap installation
core test_location_plot_global (obspy.core.tests.test_network.NetworkCartopyTestCase) cartopy not installed
core test_location_plot_local (obspy.core.tests.test_network.NetworkCartopyTestCase) cartopy not installed
core test_location_plot_ortho (obspy.core.tests.test_network.NetworkCartopyTestCase) cartopy not installed
core test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) matplotlib 3.0.1 is not compatible with basemap
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryCartopyTestCase) cartopy not installed
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryCartopyTestCase) cartopy not installed
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryCartopyTestCase) cartopy not installed
geodetics test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
geodetics test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
imaging test_script_plot (obspy.imaging.tests.test_mopad_script.MopadTestCase) Currently broken until further review.
signal test_ppsd_spectrogram_plot (obspy.signal.tests.test_spectral_estimation.PsdTestCase) matplotlib >= 3 shifts labels
taup test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) test needs geographiclib >= 1.34
taup test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) Module geographiclib is not installed
taup test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime Test
37.524s test_ppsd_restricted_stacks (obspy.signal.tests.test_spectral_estimation.PsdTestCase)
11.189s test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase)
8.098s __init__ (obspy.taup)
6.208s test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
6.005s test_plot_multiple_traces (obspy.imaging.tests.test_waveform.WaveformTestCase)
4.682s test_relcal_different_overlaps (obspy.signal.tests.test_calibration.CalibrationTestCase)
3.899s plot_travel_times (obspy.taup.tau)
3.661s test_remove_response_plot (obspy.core.tests.test_trace.TraceTestCase)
3.337s test_regional_models (obspy.taup.tests.test_tau.TauPyModelTestCase)
3.273s test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase)
3.236s test_polarization_vidale (obspy.signal.tests.test_polarization.PolarizationTestCase)
2.775s test_correlate_stream_template_and_correlation_detector (obspy.signal.tests.test_cross_correlation.CrossCorrelationTestCase)
2.714s test_auto_read_arclink_xml (obspy.io.arclink.tests.test_inventory_xml.ArclinkInventoryTestCase)
2.695s test_many_identically_named_phases (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
2.421s read (obspy.core.stream)
1.899s test_evalresp_file_like_object (obspy.signal.tests.test_invsim.InvSimTestCase)
1.894s test_plot_tf_misfits (obspy.signal.tests.test_tf_misfit.TfPlotTestCase)
1.812s test_rotate2zne_against_lqt_different_combinations (obspy.signal.tests.test_rotate.RotateTestCase)
1.773s test_plot_tf_gofs (obspy.signal.tests.test_tf_misfit.TfPlotTestCase)
1.717s test_plot_travel_times_convenience (obspy.taup.tests.test_plotting.TauPyPlottingTestCase)

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