#137265 Report by node IGSKACCGLT0044 covering 2060 tests from 34 modules resulted into 11 errors

Report

ObsPy version
1.4.0
GitHub Pull Request
-
Report file
JSON document
Total runtime
169.3 sec
Report date/time
Feb. 21, 2024, 2:44 p.m.

System / Python

Architecture
64bit
Machine
AMD64
Node
IGSKACCGLT0044
Processor
Intel64 Family 6 Model 158 Stepping 13, GenuineIntel
Python Compiler
MSC v.1937 64 bit (AMD64)
Python Implementation
CPython
Python Version
3.11.8
Release
10
System
Windows
Version
10.0.19045

Dependencies

cartopy
---
decorator
5.1.1
flake8
---
geographiclib
---
lxml
5.1.0
matplotlib
3.8.3
numpy
1.26.4
obspy
1.4.0
pyproj
---
pytest
8.0.1
pytest-json-report
1.5.0
requests
2.31.0
scipy
1.12.0
setuptools
69.1.0
shapefile
---
sqlalchemy
2.0.27

Modules (34)

Module Errors / Failures Tracebacks
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.nrl - -
obspy.clients.syngine Not tested -
obspy.core 2 10 11
obspy.core.inventory - -
obspy.core.util - -
obspy.imaging - -
obspy.io.alsep - -
obspy.io.cmtsolution - -
obspy.io.dmx - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.wav - -
obspy.io.xseed - -
obspy.io.zmap - -
obspy.signal - -
obspy.taup - -
other 9 1 2 3 4 5 6 7 8 9
Summary 11 11

Tracebacks (11)

Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1546, in _fetch_index_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1547, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3d5d2890; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e225c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2a9990; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2169d0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed79150; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78fd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3d5d2890; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e225c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2a9990; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2169d0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed79150; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78fd0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 380, in test_get_availability
actual_avail = client.get_availability(
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 415, in get_availability
tsindex_rows = self._get_tsindex_rows(network, station,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 679, in _get_tsindex_rows
return self.request_handler._fetch_index_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3d5d2890; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e225c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2a9990; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2169d0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed79150; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78fd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3d5d2890; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e225c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2a9990; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2169d0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed79150; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78fd0; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1727, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef19556210; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e04e790; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2caf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c2650; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e283fd0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e096610; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef19556210; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e04e790; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2caf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c2650; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e283fd0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e096610; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 235, in test_get_availability_extent
actual_avail_extents = client.get_availability_extent(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 358, in get_availability_extent
summary_rows = self._get_summary_rows(network, station,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef19556210; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e04e790; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2caf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c2650; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e283fd0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e096610; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef19556210; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e04e790; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2caf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c2650; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e283fd0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e096610; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1727, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3f8ba810; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba650; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba5d0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba550; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba4d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba450; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3f8ba810; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba650; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba5d0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba550; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba4d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba450; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 174, in test_get_nslc
actual_nslc = client.get_nslc("I*,CU",
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 317, in get_nslc
summary_rows = self._get_summary_rows(network, station, location,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3f8ba810; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba650; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba5d0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba550; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba4d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba450; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3f8ba810; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba650; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba5d0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba550; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba4d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba450; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1546, in _fetch_index_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1547, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3dcbff50; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e1c87d0; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2cac10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e225e10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bfb10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bea90; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3dcbff50; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e1c87d0; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2cac10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e225e10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bfb10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bea90; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 61, in test_get_waveforms
returned_stream = client.get_waveforms(
^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 262, in get_waveforms
return self._get_waveforms(query_rows, merge)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 623, in _get_waveforms
index_rows = self.request_handler._fetch_index_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3dcbff50; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e1c87d0; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2cac10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e225e10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bfb10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bea90; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3dcbff50; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e1c87d0; station>, <sqlalchemy.sql.elements.Label at 0x1ef3e2cac10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3e225e10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bfb10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2bea90; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1546, in _fetch_index_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1547, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3f8bbbd0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3dfeb490; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a3050; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2d10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bc10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bbd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3f8bbbd0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3dfeb490; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a3050; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2d10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bc10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bbd0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 141, in test_get_waveforms_bulk
returned_stream = client.get_waveforms_bulk(bulk_request)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 288, in get_waveforms_bulk
return self._get_waveforms(query_rows, merge)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 623, in _get_waveforms
index_rows = self.request_handler._fetch_index_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3f8bbbd0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3dfeb490; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a3050; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2d10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bc10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bbd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3f8bbbd0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3dfeb490; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a3050; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2d10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bc10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3ed1bbd0; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1546, in _fetch_index_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1547, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3d637e10; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e24b210; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cabd0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cac10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab90; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3d637e10; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e24b210; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cabd0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cac10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab90; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 580, in test_has_data
self.assertTrue(client.has_data())
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 558, in has_data
avail_percentage = self.get_availability_percentage(network,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 494, in get_availability_percentage
avail = self.get_availability(network, station,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 415, in get_availability
tsindex_rows = self._get_tsindex_rows(network, station,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 679, in _get_tsindex_rows
return self.request_handler._fetch_index_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3d637e10; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e24b210; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cabd0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cac10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab90; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3d637e10; network>, <sqlalchemy.sql.elements.Label at 0x1ef3e24b210; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cabd0; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cac10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab10; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8cab90; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1546, in _fetch_index_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1547, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3e2af7d0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2550; station>, <sqlalchemy.sql.elements.Label at 0x1ef3dd53250; location>, <sqlalchemy.sql.elements.Label at 0x1ef3df95b10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2ca010; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba210; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3e2af7d0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2550; station>, <sqlalchemy.sql.elements.Label at 0x1ef3dd53250; location>, <sqlalchemy.sql.elements.Label at 0x1ef3df95b10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2ca010; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba210; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 773, in test_build_file_list
self.assertRaisesRegex(OSError,
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 1318, in assertRaisesRegex
return context.handle('assertRaisesRegex', args, kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 237, in handle
callable_obj(*args, **kwargs)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1064, in build_file_list
tsindex = self.request_handler._fetch_index_rows()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3e2af7d0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2550; station>, <sqlalchemy.sql.elements.Label at 0x1ef3dd53250; location>, <sqlalchemy.sql.elements.Label at 0x1ef3df95b10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2ca010; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba210; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3e2af7d0; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8a2550; station>, <sqlalchemy.sql.elements.Label at 0x1ef3dd53250; location>, <sqlalchemy.sql.elements.Label at 0x1ef3df95b10; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3e2ca010; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8ba210; endtime>)?
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1727, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3dbf6390; network>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bb910; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bbe50; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8baad0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c8090; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3dbf6390; network>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bb910; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bbe50; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8baad0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c8090; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 57, in testPartExecutor
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 623, in run
self._callTestMethod(testMethod)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\unittest\case.py", line 579, in _callTestMethod
if method() is not None:
^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tests\test_tsindex.py", line 919, in test__fetch_summary_rows
ts_summary_data = request_handler._fetch_summary_rows(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3dbf6390; network>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bb910; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bbe50; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8baad0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c8090; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3dbf6390; network>, <sqlalchemy.sql.elements.Label at 0x1ef3ed78c90; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bb910; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8bbe50; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8baad0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3e2c8090; endtime>)?
055 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
056
057 * :meth:`~Client.get_availability_extent()`:
058 Returns a list of (network, station, location, channel, earliest, latest)
059 tuples that represent the full extent of available data. This example
060 retrieves from the very small obspy test tsindex database a list of all
061 available ("BHZ") channel extents from the Global Seismograph Network
062 ("IU") for all times.
063
064 >>> extents = client.get_availability_extent(network="IU", channel="BHZ")
UNEXPECTED EXCEPTION: ValueError('Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3c526450; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcc10; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcfd0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd0d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd150; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3c526450; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcc10; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcfd0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd0d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd150; endtime>)?')
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1727, in <listcomp>
sa.select([
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\_selectable_constructors.py", line 482, in select
return Select(*entities)
^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5131, in __init__
self._raw_columns = [
^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\selectable.py", line 5132, in <listcomp>
coercions.expect(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 396, in expect
resolved = impl._literal_coercion(
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 634, in _literal_coercion
self._raise_for_expected(element, argname)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 1122, in _raise_for_expected
return super()._raise_for_expected(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 693, in _raise_for_expected
super()._raise_for_expected(
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\sqlalchemy\sql\coercions.py", line 518, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3c526450; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcc10; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcfd0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd0d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd150; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3c526450; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcc10; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcfd0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd0d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd150; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\doctest.py", line 1355, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.clients.filesystem.tsindex[6]>", line 1, in <module>
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 358, in get_availability_extent
summary_rows = self._get_summary_rows(network, station,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x1ef3c526450; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcc10; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcfd0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd0d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd150; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x1ef3c526450; network>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcc10; station>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcf10; location>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fcfd0; channel>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd0d0; starttime>, <sqlalchemy.sql.elements.Label at 0x1ef3f8fd150; endtime>)?
C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\tsindex.py:64: UnexpectedException
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 346, in from_call
result: Optional[TResult] = func()
^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 267, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_hooks.py", line 501, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_manager.py", line 119, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 181, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_result.py", line 99, in get_result
raise exc.with_traceback(exc.__traceback__)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\threadexception.py", line 87, in pytest_runtest_call
yield from thread_exception_runtest_hook()
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\threadexception.py", line 63, in thread_exception_runtest_hook
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\unraisableexception.py", line 90, in pytest_runtest_call
yield from unraisable_exception_runtest_hook()
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\unraisableexception.py", line 65, in unraisable_exception_runtest_hook
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\logging.py", line 839, in pytest_runtest_call
yield from self._runtest_for(item, "call")
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\logging.py", line 822, in _runtest_for
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\capture.py", line 882, in pytest_runtest_call
return (yield)
^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\skipping.py", line 256, in pytest_runtest_call
return (yield)
^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 102, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 182, in pytest_runtest_call
raise e
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 174, in pytest_runtest_call
item.runtest()
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\python.py", line 1831, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_hooks.py", line 501, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_manager.py", line 119, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 138, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 102, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\core\tests\test_trace.py", line 1360, in test_taper_onesided
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x000001EF3F9F3AD0>, <warnings.WarningMessage object at 0x000001EF4168E310>])
Traceback (most recent call last):
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 346, in from_call
result: Optional[TResult] = func()
^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 267, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_hooks.py", line 501, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_manager.py", line 119, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 181, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_result.py", line 99, in get_result
raise exc.with_traceback(exc.__traceback__)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\threadexception.py", line 87, in pytest_runtest_call
yield from thread_exception_runtest_hook()
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\threadexception.py", line 63, in thread_exception_runtest_hook
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\unraisableexception.py", line 90, in pytest_runtest_call
yield from unraisable_exception_runtest_hook()
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\unraisableexception.py", line 65, in unraisable_exception_runtest_hook
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\logging.py", line 839, in pytest_runtest_call
yield from self._runtest_for(item, "call")
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\logging.py", line 822, in _runtest_for
yield
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\capture.py", line 882, in pytest_runtest_call
return (yield)
^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 166, in _multicall
teardown.throw(outcome._exception)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\skipping.py", line 256, in pytest_runtest_call
return (yield)
^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 102, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 182, in pytest_runtest_call
raise e
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\runner.py", line 174, in pytest_runtest_call
item.runtest()
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\python.py", line 1831, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_hooks.py", line 501, in __call__
return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_manager.py", line 119, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 138, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\pluggy\_callers.py", line 102, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\core\tests\test_trace.py", line 1390, in test_taper_length
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x000001EF41332DD0>, <warnings.WarningMessage object at 0x000001EF417EF650>])

Skipped tests (44)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_combined_station_event_plot Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_local Skipped: cartopy not installed
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
other geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_with_geographiclib Skipped: Module geographiclib is not installed
other geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_issue_375 Skipped: Module geographiclib is not installed
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
imaging imaging/tests/test_scan.py::TestScan::test_scan_dir_no_permission Skipped: unable to remove read permission from a test file for testing purposes
other io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
other io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.gcf io/gcf/core.py::obspy.io.gcf.core._write_gcf Skipped: all tests skipped by +SKIP option
io.nlloc io/nlloc/tests/test_util.py::NLLOCTestCase::test_read_nlloc_scatter_coordinate_conversion Skipped: pyproj not installed
other io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
other io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
other io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
other io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_with_extra_field Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_with_extra_field Skipped: pyshp not installed
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
other io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
signal signal/tests/test_invsim.py::InvSimTestCase::test_evalresp_file_like_object Skipped: unreproducible test fail encountered on Appveyor sometimes.
signal signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation Skipped: Test requires the jsonschema module
taup taup/tests/test_ray_paths.py::TestRayPathCalculations::test_compute_ray_paths Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_p_iasp91_geo_manual Skipped: Module geographiclib is not installed
taup taup/tests/test_tau.py::TestTauPyModel::test_pierce_p_iasp91_geo Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_single_path_geo_iasp91 Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_geo Skipped: Module geographiclib is not installed or too old.
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_resampling Skipped: Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime Test
10.069s core/stream.py::obspy.core.stream.read
5.694s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
5.667s core/tests/test_waveform_plugins.py::TestWaveformPlugins::test_is_format
3.776s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
3.430s taup/__init__.py::obspy.taup
3.277s taup/tests/test_tau.py::TestTauPyModel::test_regional_models
2.687s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
1.885s io/mseed/tests/test_mseed_special_issues.py::MSEEDSpecialIssueTestCase::test_infinite_loop
1.756s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
1.733s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_many_identically_named_phases
1.596s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
1.593s io/mseed/tests/test_mseed_reading_and_writing.py::MSEEDReadingAndWritingTestCase::test_read_and_write_traces
1.591s core/tests/test_trace.py::TestTrace::test_remove_response_plot
1.486s signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
1.400s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale
1.242s clients/filesystem/tests/test_sds.py::SDSTestCase::test_read_from_sds_with_wildcarded_seed_ids
1.181s io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
1.173s taup/tests/test_taup_plotting.py::TestTauPyPlotting::test_spherical_many_phases
1.125s signal/tf_misfit.py::obspy.signal.tf_misfit.plot_tfr
1.122s taup/tests/test_tau.py::TestTauPyModel::test_high_slowness_crust

Warnings (50)

Stage Filename Category Message
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:391 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\imaging\scripts\mopad.py:840 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:301 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:284 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:285 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\core\util\misc.py:398 UserWarning PermissionError(13, 'Access is denied')
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:243 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau.py:1228 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tf_misfit.py:1344 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tf_misfit.py:1084 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\io\sac\tests\test_sactrace.py:187 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\taup_geo.py:91 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\seismic_phase.py:1618 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:389 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\seismic_phase.py:1645 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau.py:1115 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:420 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\imaging\beachball.py:274 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\io\sac\sactrace.py:1543 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau.py:247 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
collect C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\clients\filesystem\db.py:18 MovedIn20Warning The ``declarative_base()`` function is now available as sqlalchemy.orm.declarative_base(). (deprecated since: 2.0) (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:286 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau.py:559 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tests\test_hoctavbands.py:87 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tests\test_polarization.py:60 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:263 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:264 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\io\mseed\tests\test_mseed_util.py:75 DeprecationWarning NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 128 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype) will give the desired result (the cast overflows).
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\core\trace.py:2174 DeprecationWarning Importing hann from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hann' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:419 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest <doctest obspy.signal._sosfilt._sosfilt[13]>:1 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:299 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tests\test_freqattributes.py:88 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tests\test_polarization.py:62 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\array_analysis.py:833 DeprecationWarning 'scipy.integrate.cumtrapz' is deprecated in favour of 'scipy.integrate.cumulative_trapezoid' and will be removed in SciPy 1.14.0
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\differentiate_and_integrate.py:27 DeprecationWarning 'scipy.integrate.cumtrapz' is deprecated in favour of 'scipy.integrate.cumulative_trapezoid' and will be removed in SciPy 1.14.0
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:244 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tests\test_cpxtrace.py:85 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:390 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:265 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\_pytest\python.py:194 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\slowness_model.py:1818 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\cpxtrace.py:97 DeprecationWarning 'scipy.integrate.cumtrapz' is deprecated in favour of 'scipy.integrate.cumulative_trapezoid' and will be removed in SciPy 1.14.0
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\imaging\scripts\scan.py:443 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:245 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\core\util\misc.py:537 MatplotlibDeprecationWarning Auto-close()ing of figures upon backend switching is deprecated since 3.8 and will be removed two minor releases later. To suppress this warning, explicitly call plt.close('all') first.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:418 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\cross_correlation.py:985 UserWarning FigureCanvasAgg is non-interactive, and thus cannot be shown
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\signal\tests\test_polarization.py:64 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated since SciPy 1.1.0 and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest C:\Users\dpeterson\anaconda3\envs\msnoise\Lib\site-packages\obspy\taup\tau_branch.py:300 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)