#111758 Report by node Samindas-MBP covering 1824 tests from 46 modules resulted into 12 errors

Report

ObsPy version
0.0.0+archive
Continuous Integration
-
GitHub Pull Request
-
Report file
XML document
Total runtime
159.9 sec
Report date/time
2020-08-10 08:15:31

System / Python

Architecture
64bit
Machine
x86_64
Node
Samindas-MBP
Processor
i386
Python Compiler
GCC 4.2.1 Compatible Clang 4.0.1 (tags/RELEASE_401/final)
Python Implementation
CPython
Python Version
3.6.7
Release
19.6.0
System
Darwin
Version
Darwin Kernel Version 19.6.0: Sun Jul 5 00:43:10 PDT 2020; root:xnu-6153.141.1~9/RELEASE_X86_64

Dependencies

cartopy
0.17.0
decorator
4.4.0
flake8
---
future
0.17.1
geographiclib
---
lxml.etree
4.3.3
m2crypto
---
matplotlib
3.0.3
mock
---
mpl_toolkits.basemap
---
numpy
1.16.3
pep8-naming
---
pyflakes
---
pyimgur
---
pyproj
1.9.6
requests
2.21.0
scipy
1.2.1
setuptools
41.0.1
shapefile
2.1.0
sqlalchemy
1.3.3

Modules (46)

Module Errors / Failures Tracebacks
obspy.clients.arclink Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn Not tested -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core - -
obspy.db - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile 5 1 2 3 4 5
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal 7 6 7 8 9 10 11 12
obspy.taup - -
Summary 12 12

Tracebacks (12)

Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/tests/test_core.py", line 178, in test_write_catalog_shapefile
_write_shapefile(cat, "catalog.shp")
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/core.py", line 73, in _write_shapefile
writer = shapefile.Writer(shapefile.POINT)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/shapefile.py", line 1057, in __init__
self.shp = self.__getFileObj(os.path.splitext(target)[0] + '.shp')
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/posixpath.py", line 122, in splitext
p = os.fspath(p)
TypeError: expected str, bytes or os.PathLike object, not int
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/tests/test_core.py", line 275, in test_write_catalog_shapefile_via_plugin
cat.write("catalog.shp", "SHAPEFILE")
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/core/event/catalog.py", line 515, in write
return write_format(self, filename, **kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/core.py", line 73, in _write_shapefile
writer = shapefile.Writer(shapefile.POINT)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/shapefile.py", line 1057, in __init__
self.shp = self.__getFileObj(os.path.splitext(target)[0] + '.shp')
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/posixpath.py", line 122, in splitext
p = os.fspath(p)
TypeError: expected str, bytes or os.PathLike object, not int
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/tests/test_core.py", line 225, in test_write_catalog_shapefile_with_extra_field
extra_fields=bad_extra_fields_wrong_length)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/core.py", line 73, in _write_shapefile
writer = shapefile.Writer(shapefile.POINT)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/shapefile.py", line 1057, in __init__
self.shp = self.__getFileObj(os.path.splitext(target)[0] + '.shp')
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/posixpath.py", line 122, in splitext
p = os.fspath(p)
TypeError: expected str, bytes or os.PathLike object, not int
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/tests/test_core.py", line 309, in test_write_inventory_shapefile
_write_shapefile(inv, "inventory.shp")
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/core.py", line 73, in _write_shapefile
writer = shapefile.Writer(shapefile.POINT)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/shapefile.py", line 1057, in __init__
self.shp = self.__getFileObj(os.path.splitext(target)[0] + '.shp')
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/posixpath.py", line 122, in splitext
p = os.fspath(p)
TypeError: expected str, bytes or os.PathLike object, not int
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/tests/test_core.py", line 339, in test_write_inventory_shapefile_via_plugin
inv.write("inventory.shp", "SHAPEFILE")
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/core/inventory/inventory.py", line 320, in write
return write_format(self, path_or_file_object, **kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/io/shapefile/core.py", line 73, in _write_shapefile
writer = shapefile.Writer(shapefile.POINT)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/shapefile.py", line 1057, in __init__
self.shp = self.__getFileObj(os.path.splitext(target)[0] + '.shp')
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/posixpath.py", line 122, in splitext
p = os.fspath(p)
TypeError: expected str, bytes or os.PathLike object, not int
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 798, in test_exception_reading_newer_npz
items = {key: data[key] for key in data.files}
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 798, in <dictcomp>
items = {key: data[key] for key in data.files}
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 224, in test_ppsd
ppsd_loaded = PPSD.load_npz(filename)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1334, in load_npz
return _load(data)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1308, in _load
data_ = data[key]
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 569, in test_ppsd_add_npz
ppsd = PPSD.load_npz(tf1.name, metadata=None)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1334, in load_npz
return _load(data)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1308, in _load
data_ = data[key]
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 411, in test_ppsd_save_and_load_npz
ppsd_loaded = PPSD.load_npz(filename, metadata=paz)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1334, in load_npz
return _load(data)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1308, in _load
data_ = data[key]
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 765, in test_ppsd_spectrogram_plot
ppsd = PPSD.load_npz(self.example_ppsd_npz)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1334, in load_npz
return _load(data)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1308, in _load
data_ = data[key]
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 719, in test_ppsd_temporal_plot
ppsd = PPSD.load_npz(self.example_ppsd_npz)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1334, in load_npz
return _load(data)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1308, in _load
data_ = data[key]
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/tests/test_spectral_estimation.py", line 353, in test_ppsd_w_iris_against_obspy_results
results_paz = PPSD.load_npz(filename_paz, metadata=None)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1334, in load_npz
return _load(data)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/obspy-0.0.0+archive-py3.6-macosx-10.7-x86_64.egg/obspy/signal/spectral_estimation.py", line 1308, in _load
data_ = data[key]
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/Users/sammbp/miniconda3/envs/nexus/lib/python3.6/site-packages/numpy/lib/format.py", line 692, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False

Skipped tests (23)

Submodule Test Skip message
core test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) basemap not installed
core test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_location_plot_local (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_location_plot_ortho (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) Formatting tests require at least flake8 3.0.
geodetics test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
geodetics test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
imaging test_script_plot (obspy.imaging.tests.test_mopad_script.MopadTestCase) Currently broken until further review.
signal test_schema_validation (obspy.signal.tests.test_quality_control.QualityControlTestCase) Test requires the jsonschema module
taup test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) test needs geographiclib >= 1.34
taup test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) Module geographiclib is not installed
taup test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34

Slowest tests (20)

Runtime Test
13.055s test_location_plot_local (obspy.core.tests.test_inventory.InventoryCartopyTestCase)
6.026s __init__ (obspy.taup)
5.198s test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
4.812s test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase)
3.164s test_ppsd_restricted_stacks (obspy.signal.tests.test_spectral_estimation.PsdTestCase)
2.927s read (obspy.core.stream)
2.777s plot_travel_times (obspy.taup.tau)
2.652s test_plot_multiple_traces (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.631s test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase)
2.480s test_relcal_different_overlaps (obspy.signal.tests.test_calibration.CalibrationTestCase)
2.319s test_plot_wiggles_vertical_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.258s test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase)
2.253s test_plot_azim_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.211s test_plot_wiggles_positive_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.207s test_plot_default_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.207s test_plot_wiggles_horizontal_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.203s test_plot_wiggles_negative_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.169s test_plot_colored_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.166s test_read_url_via_network (obspy.core.tests.test_stream.StreamTestCase)
2.164s test_plot_horizontal_section (obspy.imaging.tests.test_waveform.WaveformTestCase)

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