#114380 Report by node ucbtest1 covering 1743 tests from 45 modules resulted into 31 errors

Report

ObsPy version
1.1.1
GitHub Pull Request
-
Report file
XML document
Total runtime
165.8 sec
Report date/time
2021-07-29 10:04:22

System / Python

Architecture
64bit
Machine
x86_64
Node
ucbtest1
Processor
x86_64
Python Compiler
GCC 4.8.5 20150623 (Red Hat 4.8.5-16)
Python Implementation
CPython
Python Version
3.5.1
Release
3.10.0-1160.25.1.el7.x86_64
System
Linux
Version
#1 SMP Tue Apr 13 18:55:45 EDT 2021

Dependencies

cartopy
0.17.0
decorator
4.4.0
flake8
---
future
0.18.1
geographiclib
---
lxml.etree
4.4.1
m2crypto
---
matplotlib
3.0.3
mock
---
mpl_toolkits.basemap
---
numpy
1.17.3
pep8-naming
---
pyflakes
---
pyimgur
---
pyproj
1.9.5.1
requests
2.22.0
scipy
1.3.1
setuptools
18.0.1
shapefile
2.1.0
sqlalchemy
1.3.10

Modules (45)

Module Errors / Failures Tracebacks
obspy.clients.arclink Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn Not tested -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.seishub Not tested -
obspy.clients.syngine Not tested -
obspy.core 15 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
obspy.db - -
obspy.geodetics - -
obspy.imaging 10 16 17 18 19 20 21 22 23 24 25
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal 6 26 27 28 29 30 31
obspy.taup - -
Summary 31 31

Tracebacks (31)

Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_trace.py", line 1712, in test_remove_response
tr2.remove_response(pre_filt=(0.1, 0.5, 30, 50))
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_event.py", line 729, in test_catalog_plot_local
color='date', colormap='gist_heat')
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: catalog-cartopy3.png
	RMS: 19.880173285619396
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_trace.py", line 1733, in test_remove_polynomial_response
tr.remove_response()
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_network.py", line 400, in test_location_plot_local
size=13**2, outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: network_location-cartopy3.png
	RMS: 10.676433471641301
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_trace.py", line 2295, in test_remove_response_plot
water_level=60, end_stage=None, plot=ic.name)
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_stream.py", line 2237, in test_remove_response
tr.remove_response(pre_filt=(0.1, 0.5, 30, 50))
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_trace.py", line 1783, in test_processing_info_remove_response_and_sensitivity
tr.remove_response()
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_inventory.py", line 627, in test_location_plot_local
outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: inventory_location-cartopy3.png
	RMS: 10.943261636474821
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/opt/rh/rh-python35/root/usr/lib64/python3.5/doctest.py", line 2189, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.stream.Stream.remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/stream.py", line 3038, in remove_response
----------------------------------------------------------------------
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/stream.py", line 3049, in obspy.core.stream.Stream.remove_response
Failed example:
st.remove_response(inventory=inv) # doctest: +ELLIPSIS
Exception raised:
Traceback (most recent call last):
File "/opt/rh/rh-python35/root/usr/lib64/python3.5/doctest.py", line 1320, in __run
compileflags, 1), test.globs)
File "<doctest obspy.core.stream.Stream.remove_response[3]>", line 1, in <module>
st.remove_response(inventory=inv) # doctest: +ELLIPSIS
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/stream.py", line 3069, in remove_response
tr.remove_response(*args, **kwargs)
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_station.py", line 76, in test_response_plot_degrees
outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: station_response_degrees.png
	RMS: 6.394747464825244
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/opt/rh/rh-python35/root/usr/lib64/python3.5/doctest.py", line 2189, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for obspy.core.trace.Trace.remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 1, in remove_response
----------------------------------------------------------------------
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 42, in obspy.core.trace.Trace.remove_response
Failed example:
tr.remove_response(inventory=inv) # doctest: +ELLIPSIS
Exception raised:
Traceback (most recent call last):
File "/opt/rh/rh-python35/root/usr/lib64/python3.5/doctest.py", line 1320, in __run
compileflags, 1), test.globs)
File "<doctest obspy.core.trace.Trace.remove_response[4]>", line 1, in <module>
tr.remove_response(inventory=inv) # doctest: +ELLIPSIS
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_channel.py", line 61, in test_response_plot
cha.plot(0.005, outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: channel_response.png
	RMS: 4.882834645011511
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_station.py", line 56, in test_response_plot
sta.plot(0.05, channel="*[NE]", outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: station_response.png
	RMS: 6.448158801472894
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_network.py", line 147, in test_response_plot
time=t, outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: network_response.png
	RMS: 3.494109258640444
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/tests/test_trace.py", line 2586, in test_dtype_is_not_unnecessarily_changed
tr_int32.copy().remove_response(inventory=inv).data.dtype,
File "</share/apps/python3.5/lib/python3.5/site-packages/decorator.py:decorator-gen-28>", line 2, in remove_response
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 235, in _add_processing_info
result = func(*args, **kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/trace.py", line 2722, in remove_response
limit_numpy_fft_cache()
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/misc.py", line 614, in limit_numpy_fft_cache
if not hasattr(np.fft.fftpack, cache):
AttributeError: module 'numpy.fft' has no attribute 'fftpack'
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_scan.py", line 71, in test_scan_function_and_scanner_class
scan(paths=os.curdir, plot=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: scan.png
	RMS: 8.132253848886045
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_waveform.py", line 216, in test_plot_multiple_traces
st.plot(outfile=ic.name, automerge=False)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: waveform_1_trace.png
	RMS: 17.1411335681162
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_plot.py", line 44, in test_plot
obspy_plot(['--outfile', ic.name] + all_files)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: plot.png
	RMS: 11.02481020244793
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_scan.py", line 55, in test_scan_main_method
obspy_scan([os.curdir] + ['--output', ic.name])
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: scan.png
	RMS: 8.132253848886045
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_scan.py", line 96, in test_scanner_manually_add_streams
scanner.plot(ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: scan.png
	RMS: 8.132253848886045
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_ppsd.py", line 44, in test_ppsd_plot
fig.savefig(ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: ppsd.png
	RMS: 19.552837816201173
	Tolerance: 4.5
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_scan.py", line 126, in test_scan_save_load_npz
scanner.plot(ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: scan.png
	RMS: 8.132253848886045
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_waveform.py", line 255, in test_plot_with_labels
st.plot(outfile=ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: waveform_labels.png
	RMS: 10.084385289479307
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_plot.py", line 60, in test_plot_no_merge
all_files)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: plot_nomerge.png
	RMS: 9.1898904599928
	Tolerance: 3.0
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/imaging/tests/test_ppsd.py", line 85, in test_ppsd_plot_cumulative
fig.savefig(ic.name)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/core/util/testing.py", line 510, in __exit__
raise ImageComparisonException(msg)
obspy.core.util.testing.ImageComparisonException: Image comparison failed.
	File: ppsd_cumulative.png
	RMS: 19.552839520983476
	Tolerance: 4.5
Upload to imgur failed (caught ImportError: No module named 'pyimgur').
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 352, in test_ppsd_w_iris_against_obspy_results
results_paz = PPSD.load_npz(filename_paz, metadata=None)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1257, in load_npz
return _load(data)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1242, in _load
data_ = data[key]
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/format.py", line 722, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 723, in test_exception_reading_newer_npz
items = {key: data[key] for key in data.files}
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 723, in <dictcomp>
items = {key: data[key] for key in data.files}
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/format.py", line 722, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 410, in test_ppsd_save_and_load_npz
ppsd_loaded = PPSD.load_npz(filename, metadata=paz)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1257, in load_npz
return _load(data)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1242, in _load
data_ = data[key]
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/format.py", line 722, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 223, in test_ppsd
ppsd_loaded = PPSD.load_npz(filename)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1257, in load_npz
return _load(data)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1242, in _load
data_ = data[key]
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/format.py", line 722, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 659, in test_ppsd_temporal_plot
ppsd = PPSD.load_npz(self.example_ppsd_npz)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1257, in load_npz
return _load(data)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1242, in _load
data_ = data[key]
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/format.py", line 722, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False
Traceback (most recent call last):
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/tests/test_spectral_estimation.py", line 564, in test_ppsd_add_npz
ppsd = PPSD.load_npz(tf1.name, metadata=None)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1257, in load_npz
return _load(data)
File "/share/apps/python3.5/lib/python3.5/site-packages/obspy/signal/spectral_estimation.py", line 1242, in _load
data_ = data[key]
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/npyio.py", line 262, in __getitem__
pickle_kwargs=self.pickle_kwargs)
File "/share/apps/python3.5/lib/python3.5/site-packages/numpy/lib/format.py", line 722, in read_array
raise ValueError("Object arrays cannot be loaded when "
ValueError: Object arrays cannot be loaded when allow_pickle=False

Skipped tests (28)

Submodule Test Skip message
taup test_compute_ray_paths (obspy.taup.tests.test_ray_paths.RayPathCalculationsTestCase) test needs geographiclib >= 1.34
taup test_p_iasp91_geo_manual (obspy.taup.tests.test_tau.TauPyModelTestCase) Module geographiclib is not installed
taup test_pierce_p_iasp91_geo (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_single_path_geo_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase) test needs geographiclib >= 1.34
taup test_path_geo (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
taup test_path_resampling (obspy.taup.tests.test_taup_geo.TaupGeoTestCase) Module geographiclib is not installed or too old.
core test_flake8 (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) No code formatting tests for release builds
core test_use_obspy_deprecation_warning (obspy.core.tests.test_code_formatting.CodeFormattingTestCase) No code formatting tests for release builds
core test_future_imports_in_every_file (obspy.core.tests.test_code_formatting.FutureUsageTestCase) No code formatting tests for release builds
core test_no_pyplot_import_in_any_file (obspy.core.tests.test_code_formatting.MatplotlibBackendUsageTestCase) No code formatting tests for release builds
core test_catalog_plot_global (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_local (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_ortho (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_catalog_plot_ortho_longitude_wrap (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_plot_catalog_before_1900 (obspy.core.tests.test_event.CatalogBasemapTestCase) basemap not installed
core test_plot_farfield_without_quiver_with_maps (obspy.core.tests.test_event.EventTestCase) basemap not installed
core test_combined_station_event_plot (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_global (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_local (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_ortho (obspy.core.tests.test_inventory.InventoryBasemapTestCase) basemap not installed
core test_location_plot_global (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_location_plot_local (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
core test_location_plot_ortho (obspy.core.tests.test_network.NetworkBasemapTestCase) basemap not installed
geodetics test_gps_2_dist_azimuth_with_geographiclib (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
geodetics test_issue_375 (obspy.geodetics.tests.test_util_geodetics.UtilGeodeticsTestCase) Module geographiclib is not installed
signal test_schema_validation (obspy.signal.tests.test_quality_control.QualityControlTestCase) Test requires the jsonschema module
signal test_ppsd_spectrogram_plot (obspy.signal.tests.test_spectral_estimation.PsdTestCase) matplotlib >= 3 shifts labels
imaging test_script_plot (obspy.imaging.tests.test_mopad_script.MopadTestCase) Currently broken until further review.

Slowest tests (20)

Runtime Test
8.023s test_catalog_plot_local (obspy.core.tests.test_event.CatalogCartopyTestCase)
6.746s __init__ (obspy.taup)
5.654s test_shoot_existing_ray_param (obspy.taup.tests.test_seismic_phase.TauPySeismicPhaseTestCase)
4.976s test_response_calculation_from_seed_and_xseed (obspy.io.xseed.tests.test_core.CoreTestCase)
4.034s test_relcal_different_overlaps (obspy.signal.tests.test_calibration.CalibrationTestCase)
4.012s read (obspy.core.stream)
3.362s test_ppsd_restricted_stacks (obspy.signal.tests.test_spectral_estimation.PsdTestCase)
3.254s test_catalog_plot_global (obspy.core.tests.test_event.CatalogCartopyTestCase)
3.073s plot_travel_times (obspy.taup.tau)
2.991s test_vs_java_iasp91 (obspy.taup.tests.test_tau.TauPyModelTestCase)
2.674s test_plot_ref_time_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.672s test_regional_models (obspy.taup.tests.test_tau.TauPyModelTestCase)
2.584s test_plot_azim_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.572s test_plot_wiggles_horizontal_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.567s test_plot_wiggles_vertical_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.552s test_plot_wiggles_negative_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.548s test_plot_default_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.546s test_plot_colored_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.522s test_plot_wiggles_positive_section (obspy.imaging.tests.test_waveform.WaveformTestCase)
2.518s test_plot_horizontal_section (obspy.imaging.tests.test_waveform.WaveformTestCase)