#124348 Report by node gh-actions covering 2013 tests from 59 modules resulted into 8 errors

Report

ObsPy version
1.3.0.post0+117.g58478a5b2b
GitHub Pull Request
https://github.com/obspy/obspy/pull/3055
Report file
JSON document
Total runtime
321.0 sec
Report date/time
May 20, 2022, 3:17 p.m.

System / Python

Architecture
64bit
Machine
AMD64
Node
gh-actions
Processor
Intel64 Family 6 Model 85 Stepping 7, GenuineIntel
Python Compiler
MSC v.1916 64 bit (AMD64)
Python Implementation
CPython
Python Version
3.7.12
Release
10
System
Windows
Version
10.0.20348

Dependencies

cartopy
0.17.0
decorator
5.1.1
flake8
---
geographiclib
2.0
lxml
4.8.0
matplotlib
3.2.2
numpy
1.15.4
obspy
1.3.0.post0+117.g58478a5b2b
pyproj
2.6.1.post1
pytest
7.1.2
pytest-json-report
1.5.0
requests
2.27.1
scipy
1.1.0
setuptools
62.3.2
shapefile
---
sqlalchemy
1.4.36

Modules (59)

Module Errors / Failures Tracebacks
obspy.clients Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl Not tested -
obspy.clients.seedlink Not tested -
obspy.clients.syngine Not tested -
obspy.core 1 1
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf 7 2 3 4 5 6 7 8
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 8 8

Tracebacks (8)

Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\core\tests\test_waveform_plugins.py", line 98, in test_read_and_write
st = read(outfile)
File "C:\Miniconda3\envs\test\lib\site-packages\decorator.py", line 232, in fun
return caller(func, *(extras + args), **kw)
File "d:\a\obspy\obspy\obspy\core\util\decorator.py", line 291, in _map_example_filename
return func(*args, **kwargs)
File "d:\a\obspy\obspy\obspy\core\stream.py", line 208, in read
st = _generic_reader(pathname_or_url, _read, **kwargs)
File "d:\a\obspy\obspy\obspy\core\util\base.py", line 657, in _generic_reader
generic = callback_func(pathnames[0], **kwargs)
File "C:\Miniconda3\envs\test\lib\site-packages\decorator.py", line 232, in fun
return caller(func, *(extras + args), **kw)
File "d:\a\obspy\obspy\obspy\core\util\decorator.py", line 202, in uncompress_file
result = func(filename, *args, **kwargs)
File "d:\a\obspy\obspy\obspy\core\stream.py", line 250, in _read
headonly=headonly, **kwargs)
File "d:\a\obspy\obspy\obspy\core\util\base.py", line 422, in _read_from_plugin
list_obj = read_format(filename, **kwargs)
File "d:\a\obspy\obspy\obspy\io\segy\core.py", line 175, in _read_segy
unpack_headers=unpack_trace_headers)
File "d:\a\obspy\obspy\obspy\io\segy\segy.py", line 948, in _read_segy
unpack_headers=unpack_headers, headonly=headonly)
File "d:\a\obspy\obspy\obspy\io\segy\segy.py", line 982, in _internal_read_segy
unpack_headers=unpack_headers, headonly=headonly)
File "d:\a\obspy\obspy\obspy\io\segy\segy.py", line 136, in __init__
self._read_headers()
File "d:\a\obspy\obspy\obspy\io\segy\segy.py", line 240, in _read_headers
raise NotImplementedError(msg)
NotImplementedError: Extended textual headers are not yet supported. Please contact the developers.
018 -------
019 Similar to reading any other waveform data format using :mod:`obspy.core`
020 The format will be determined automatically.
021
022 >>> from obspy import read
023 >>> st = read("/path/to/20160603_1955n.gcf")
024
025 GCF specific metadata is stored in ``stats.gcf``
026
027 >>> for k, v in sorted(st[0].stats.gcf.items()):
Differences (unified diff with -expected +actual):
@@ -1,4 +1,4 @@
'FIC': -49378
-'RIC': -49312
+'RIC': -49489
'blk': 0
'digi': 0
d:\a\obspy\obspy\obspy\io\gcf\__init__.py:27: DocTestFailure
Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\io\gcf\tests\test_core.py", line 115, in test_read_channel_prefix_via_obspy
UTCDateTime('2016-06-03T19:55:02.990000Z'))
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 852, in assertEqual
assertion_func(first, second, msg=msg)
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 845, in _baseAssertEqual
raise self.failureException(msg)
AssertionError: UTCDateTime(2016, 6, 3, 19, 55, 1, 990000) != UTCDateTime(2016, 6, 3, 19, 55, 2, 990000)
Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\io\gcf\tests\test_core.py", line 98, in test_read_head_via_module
UTCDateTime('2016-06-03T19:55:02.990000Z'))
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 852, in assertEqual
assertion_func(first, second, msg=msg)
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 845, in _baseAssertEqual
raise self.failureException(msg)
AssertionError: UTCDateTime(2016, 6, 3, 19, 55, 1, 990000) != UTCDateTime(2016, 6, 3, 19, 55, 2, 990000)
Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\io\gcf\tests\test_core.py", line 62, in test_read_head_via_obspy
UTCDateTime('2016-06-03T19:55:02.990000Z'))
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 852, in assertEqual
assertion_func(first, second, msg=msg)
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 845, in _baseAssertEqual
raise self.failureException(msg)
AssertionError: UTCDateTime(2016, 6, 3, 19, 55, 1, 990000) != UTCDateTime(2016, 6, 3, 19, 55, 2, 990000)
Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\io\gcf\tests\test_core.py", line 80, in test_read_via_module
UTCDateTime('2016-06-03T19:55:02.990000Z'))
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 852, in assertEqual
assertion_func(first, second, msg=msg)
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 845, in _baseAssertEqual
raise self.failureException(msg)
AssertionError: UTCDateTime(2016, 6, 3, 19, 55, 1, 990000) != UTCDateTime(2016, 6, 3, 19, 55, 2, 990000)
Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\io\gcf\tests\test_core.py", line 44, in test_read_via_obspy
UTCDateTime('2016-06-03T19:55:02.990000Z'))
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 852, in assertEqual
assertion_func(first, second, msg=msg)
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 845, in _baseAssertEqual
raise self.failureException(msg)
AssertionError: UTCDateTime(2016, 6, 3, 19, 55, 1, 990000) != UTCDateTime(2016, 6, 3, 19, 55, 2, 990000)
Traceback (most recent call last):
File "d:\a\obspy\obspy\obspy\io\gcf\tests\test_core.py", line 238, in test_write_read
self.assertEqual(len(out_stream), len(in_stream))
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 852, in assertEqual
assertion_func(first, second, msg=msg)
File "C:\Miniconda3\envs\test\lib\unittest\case.py", line 845, in _baseAssertEqual
raise self.failureException(msg)
AssertionError: 1 != 2

Skipped tests (22)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_bug150 Skipped: Geographiclib installed, not using calc_vincenty_inverse
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.gcf io/gcf/core.py::obspy.io.gcf.core._write_gcf Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
signal signal/tests/test_invsim.py::InvSimTestCase::test_evalresp_file_like_object Skipped: unreproducible test fail encountered on Appveyor sometimes.
signal signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation Skipped: Test requires the jsonschema module
taup taup/tests/test_tau.py::TestTauPyModel::test_paths_for_crustal_phases Skipped: Unsure if these test paths are accurate.

Slowest tests (20)

Runtime Test
13.404s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
10.436s taup/__init__.py::obspy.taup
9.626s core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local
7.747s core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps
7.721s taup/tests/test_velocity_model.py::TestTauPyVelocityModel::test_read_velocity_model
5.743s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
4.588s taup/tau.py::obspy.taup.tau.plot_travel_times
4.472s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
4.300s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_colored_section
4.118s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_default_section
4.086s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_negative_section
4.071s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_ref_time_section
4.067s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_positive_section
4.014s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_vertical_section
3.949s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_wiggles_horizontal_section
3.889s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_horizontal_section
3.848s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_azim_section
3.660s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
3.656s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
3.273s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale

Warnings (11)

Stage Filename Category Message
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\signal\signaltools.py:2230 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\signal\signaltools.py:491 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\fftpack\basic.py:160 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest C:\Miniconda3\envs\test\lib\site-packages\cartopy\mpl\geoaxes.py:782 MatplotlibDeprecationWarning Passing the minor parameter of set_xticks() positionally is deprecated since Matplotlib 3.2; the parameter will become keyword-only two minor releases later.
runtest C:\Miniconda3\envs\test\lib\site-packages\cartopy\mpl\geoaxes.py:829 MatplotlibDeprecationWarning Passing the minor parameter of set_yticks() positionally is deprecated since Matplotlib 3.2; the parameter will become keyword-only two minor releases later.
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\signal\signaltools.py:2225 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\signal\signaltools.py:1344 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\signal\signaltools.py:1593 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.
runtest C:\Miniconda3\envs\test\lib\site-packages\numpy\matrixlib\defmatrix.py:68 PendingDeprecationWarning the matrix subclass is not the recommended way to represent matrices or deal with linear algebra (see https://docs.scipy.org/doc/numpy/user/numpy-for-matlab-users.html). Please adjust your code to use regular ndarray.
runtest C:\Miniconda3\envs\test\lib\site-packages\cartopy\mpl\geoaxes.py:1063 DeprecationWarning Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3,and in 3.9 it will stop working
runtest C:\Miniconda3\envs\test\lib\site-packages\scipy\signal\signaltools.py:2223 FutureWarning Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result.