#132488 Report by node gh-actions covering 201 tests from 60 modules resulted into 4 errors

Report

ObsPy version: 1.4.0.post0+50.gc42fac9b1a.ob…

GitHub Pull Request: -

Report file: JSON document

Total runtime: 148.5 sec
Report date/time: Jan. 10, 2023, 10:02 a.m.

System / Python

Architecture: 64bit
Machine: x86_64
Node: gh-actions
Processor: x86_64
Python Compiler: GCC 10.4.0
Python Implementation: CPython
Python Version: 3.8.15
Release: 5.15.0-1024-azure
System: Linux
Version: #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022

Dependencies

cartopy: 0.21.1
decorator: 5.1.1
flake8: ---
geographiclib: 2.0
lxml: 4.9.2
matplotlib: 3.3.4
numpy: 1.20.3
obspy: 1.4.0.post0+50.gc42fac9b1a.obspy.master
pyproj: 3.4.1
pytest: 7.2.0
pytest-json-report: 1.5.0
requests: 2.28.1
scipy: 1.7.3
setuptools: 65.6.3
shapefile: ---
sqlalchemy: 1.4.46

Modules (60)

Module	Errors / Failures	Total	Executed	Skipped	Runtime	Tracebacks
obspy.clients	Not tested	-	-	-	-	-
obspy.clients.earthworm	-	9	9	-	6.08s	-
obspy.clients.fdsn	3	137	135	2	68.87s	1 2 3
obspy.clients.filesystem	Not tested	-	-	-	-	-
obspy.clients.iris	-	15	15	-	5.70s	-
obspy.clients.neic	-	5	5	-	3.19s	-
obspy.clients.nrl	1	3	3	-	1.96s	4
obspy.clients.seedlink	-	13	10	3	13.62s	-
obspy.clients.syngine	-	18	18	-	20.06s	-
obspy.core	-	1	1	-	2.26s	-
obspy.core.event	Not tested	-	-	-	-	-
obspy.core.inventory	Not tested	-	-	-	-	-
obspy.core.util	Not tested	-	-	-	-	-
obspy.geodetics	Not tested	-	-	-	-	-
obspy.imaging	Not tested	-	-	-	-	-
obspy.io.ah	Not tested	-	-	-	-	-
obspy.io.alsep	Not tested	-	-	-	-	-
obspy.io.arclink	Not tested	-	-	-	-	-
obspy.io.ascii	Not tested	-	-	-	-	-
obspy.io.cmtsolution	Not tested	-	-	-	-	-
obspy.io.cnv	Not tested	-	-	-	-	-
obspy.io.css	Not tested	-	-	-	-	-
obspy.io.dmx	Not tested	-	-	-	-	-
obspy.io.focmec	Not tested	-	-	-	-	-
obspy.io.gcf	Not tested	-	-	-	-	-
obspy.io.gse2	Not tested	-	-	-	-	-
obspy.io.hypodd	Not tested	-	-	-	-	-
obspy.io.iaspei	Not tested	-	-	-	-	-
obspy.io.json	Not tested	-	-	-	-	-
obspy.io.kinemetrics	Not tested	-	-	-	-	-
obspy.io.kml	Not tested	-	-	-	-	-
obspy.io.mseed	Not tested	-	-	-	-	-
obspy.io.ndk	Not tested	-	-	-	-	-
obspy.io.nied	Not tested	-	-	-	-	-
obspy.io.nlloc	Not tested	-	-	-	-	-
obspy.io.nordic	Not tested	-	-	-	-	-
obspy.io.pdas	Not tested	-	-	-	-	-
obspy.io.pde	Not tested	-	-	-	-	-
obspy.io.quakeml	Not tested	-	-	-	-	-
obspy.io.reftek	Not tested	-	-	-	-	-
obspy.io.rg16	Not tested	-	-	-	-	-
obspy.io.sac	Not tested	-	-	-	-	-
obspy.io.scardec	Not tested	-	-	-	-	-
obspy.io.seg2	Not tested	-	-	-	-	-
obspy.io.segy	Not tested	-	-	-	-	-
obspy.io.seisan	Not tested	-	-	-	-	-
obspy.io.seiscomp	Not tested	-	-	-	-	-
obspy.io.sh	Not tested	-	-	-	-	-
obspy.io.shapefile	Not tested	-	-	-	-	-
obspy.io.stationtxt	Not tested	-	-	-	-	-
obspy.io.stationxml	Not tested	-	-	-	-	-
obspy.io.wav	Not tested	-	-	-	-	-
obspy.io.win	Not tested	-	-	-	-	-
obspy.io.xseed	Not tested	-	-	-	-	-
obspy.io.y	Not tested	-	-	-	-	-
obspy.io.zmap	Not tested	-	-	-	-	-
obspy.realtime	Not tested	-	-	-	-	-
obspy.scripts	Not tested	-	-	-	-	-
obspy.signal	Not tested	-	-	-	-	-
obspy.taup	Not tested	-	-	-	-	-
Summary	4	201	196	5	148.48s	4

Tracebacks (4)

1 clients.fdsn

1093 - an open file handle (or file-like object) with the request
1094
1095 >>> client = Client("IRIS")
1096 >>> t1 = UTCDateTime("2010-02-27T06:30:00.000")
1097 >>> t2 = t1 + 1
1098 >>> t3 = t1 + 3
1099 >>> bulk = [("IU", "ANMO", "*", "BHZ", t1, t2),
1100 ... ("IU", "AFI", "1?", "BHE", t1, t3),
1101 ... ("GR", "GRA1", "*", "BH*", t2, t3)]
1102 >>> inv = client.get_stations_bulk(bulk)
UNEXPECTED EXCEPTION: XMLSyntaxError("Start tag expected, '<' not found, line 1, column 1")
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/doctest.py", line 1336, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.clients.fdsn.client.Client.get_stations_bulk[5]>", line 1, in <module>
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/fdsn/client.py", line 1259, in get_stations_bulk
inv = read_inventory(data_stream, format='STATIONXML')
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/decorator.py", line 232, in fun
return caller(func, *(extras + args), **kw)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/util/decorator.py", line 297, in _map_example_filename
return func(*args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/inventory/inventory.py", line 91, in read_inventory
return _generic_reader(path_or_file_object, _read, format=format,
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/util/base.py", line 624, in _generic_reader
generic = callback_func(pathname_or_url, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/decorator.py", line 232, in fun
return caller(func, *(extras + args), **kw)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/util/decorator.py", line 142, in uncompress_file
return func(filename, *args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/inventory/inventory.py", line 100, in _read
inventory, format = _read_from_plugin('inventory', filename, format=format,
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/util/base.py", line 423, in _read_from_plugin
list_obj = read_format(filename, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/io/stationxml/core.py", line 152, in _read_stationxml
root = etree.parse(path_or_file_object).getroot()
File "src/lxml/etree.pyx", line 3541, in lxml.etree.parse
File "src/lxml/parser.pxi", line 1896, in lxml.etree._parseDocument
File "src/lxml/parser.pxi", line 1916, in lxml.etree._parseMemoryDocument
File "src/lxml/parser.pxi", line 1803, in lxml.etree._parseDoc
File "src/lxml/parser.pxi", line 1144, in lxml.etree._BaseParser._parseDoc
File "src/lxml/parser.pxi", line 618, in lxml.etree._ParserContext._handleParseResultDoc
File "src/lxml/parser.pxi", line 728, in lxml.etree._handleParseResult
File "src/lxml/parser.pxi", line 657, in lxml.etree._raiseParseError
File "<string>", line 1
lxml.etree.XMLSyntaxError: Start tag expected, '<' not found, line 1, column 1
/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/fdsn/client.py:1102: UnexpectedException

2 clients.fdsn

Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/fdsn/tests/test_client.py", line 862, in test_help_function_with_iris
self.assertTrue(got[-2].startswith('Available catalogs:'))
File "/usr/share/miniconda3/envs/test/lib/python3.8/unittest/case.py", line 765, in assertTrue
raise self.failureException(msg)
AssertionError: False is not true

3 clients.fdsn

Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/fdsn/tests/test_client.py", line 412, in test_iris_event_catalog_availability
self.assertEqual(set(self.client.services["available_event_catalogs"]),
File "/usr/share/miniconda3/envs/test/lib/python3.8/unittest/case.py", line 912, in assertEqual
assertion_func(first, second, msg=msg)
File "/usr/share/miniconda3/envs/test/lib/python3.8/unittest/case.py", line 1172, in assertSetEqual
self.fail(self._formatMessage(msg, standardMsg))
File "/usr/share/miniconda3/envs/test/lib/python3.8/unittest/case.py", line 753, in fail
raise self.failureException(msg)
AssertionError: Items in the first set but not the second:
'GCMT\n '
'NEIC PDE\n '
'ISC\n '
Items in the second set but not the first:
'GCMT'
'NEIC PDE'
'ISC'

4 clients.nrl

Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 449, in _make_request
six.raise_from(e, None)
File "<string>", line 3, in raise_from
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 444, in _make_request
httplib_response = conn.getresponse()
File "/usr/share/miniconda3/envs/test/lib/python3.8/http/client.py", line 1348, in getresponse
response.begin()
File "/usr/share/miniconda3/envs/test/lib/python3.8/http/client.py", line 316, in begin
version, status, reason = self._read_status()
File "/usr/share/miniconda3/envs/test/lib/python3.8/http/client.py", line 277, in _read_status
line = str(self.fp.readline(_MAXLINE + 1), "iso-8859-1")
File "/usr/share/miniconda3/envs/test/lib/python3.8/socket.py", line 669, in readinto
return self._sock.recv_into(b)
ConnectionResetError: [Errno 104] Connection reset by peer
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/requests/adapters.py", line 489, in send
resp = conn.urlopen(
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 787, in urlopen
retries = retries.increment(
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/util/retry.py", line 550, in increment
raise six.reraise(type(error), error, _stacktrace)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/packages/six.py", line 769, in reraise
raise value.with_traceback(tb)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 449, in _make_request
six.raise_from(e, None)
File "<string>", line 3, in raise_from
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/urllib3/connectionpool.py", line 444, in _make_request
httplib_response = conn.getresponse()
File "/usr/share/miniconda3/envs/test/lib/python3.8/http/client.py", line 1348, in getresponse
response.begin()
File "/usr/share/miniconda3/envs/test/lib/python3.8/http/client.py", line 316, in begin
version, status, reason = self._read_status()
File "/usr/share/miniconda3/envs/test/lib/python3.8/http/client.py", line 277, in _read_status
line = str(self.fp.readline(_MAXLINE + 1), "iso-8859-1")
File "/usr/share/miniconda3/envs/test/lib/python3.8/socket.py", line 669, in readinto
return self._sock.recv_into(b)
urllib3.exceptions.ProtocolError: ('Connection aborted.', ConnectionResetError(104, 'Connection reset by peer'))
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/nrl/tests/test_nrl.py", line 21, in setUp
self.nrl_online = NRL(root='http://ds.iris.edu/NRL')
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/decorator.py", line 232, in fun
return caller(func, *(extras + args), **kw)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/core/util/decorator.py", line 50, in _deprecated
return func(*args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/nrl/client.py", line 360, in __init__
super(self.__class__, self).__init__()
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/nrl/client.py", line 67, in __init__
self.sensors = self._parse_ini(sensor_index)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/nrl/client.py", line 128, in _parse_ini
cp = self._get_cp_from_ini(path)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/nrl/client.py", line 382, in _get_cp_from_ini
with io.StringIO(self._download(path)) as buf:
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/nrl/client.py", line 367, in _download
r = requests.get(url)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/requests/api.py", line 73, in get
return request("get", url, params=params, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/requests/api.py", line 59, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/requests/sessions.py", line 587, in request
resp = self.send(prep, **send_kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/requests/sessions.py", line 701, in send
r = adapter.send(request, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/requests/adapters.py", line 547, in send
raise ConnectionError(err, request=request)
requests.exceptions.ConnectionError: ('Connection aborted.', ConnectionResetError(104, 'Connection reset by peer'))

Skipped tests (5)

Submodule	Test	Skip message
clients.fdsn	clients/fdsn/tests/test_client.py::ClientTestCase::test_eida_token_resolution	Skipped: Token is expired
clients.fdsn	clients/fdsn/tests/test_client.py::ClientTestCase::test_trim_stream_after_get_waveform	Skipped: data no longer available
clients.seedlink	clients/seedlink/tests/test_slclient.py::SLClientTestCase::test_info	Skipped: test must be started manually
clients.seedlink	clients/seedlink/tests/test_slclient.py::SLClientTestCase::test_issue708	Skipped: test must be started manually
clients.seedlink	clients/seedlink/tests/test_slclient.py::SLClientTestCase::test_time_window	Skipped: test must be started manually

Slowest tests (20)

Runtime	Test
10.620s	clients/fdsn/tests/test_eidaws_routing_client.py::EIDAWSRoutingClientTestCase::test_get_waveforms_integration_test
8.699s	clients/syngine/tests/test_client.py::ClientTestCase::test_get_available_models
8.695s	clients/fdsn/tests/test_client.py::ClientTestCase::test_irisph5_event
8.618s	clients/fdsn/tests/test_client.py::ClientTestCase::test_dataselect_bulk
5.478s	clients/fdsn/tests/test_eidaws_routing_client.py::EIDAWSRoutingClientTestCase::test_get_stations_integration_test
5.247s	clients/seedlink/basic_client.py::obspy.clients.seedlink.basic_client.Client.get_waveforms
4.737s	clients/seedlink/tests/test_basic_client.py::ClientTestCase::test_multiple_waveform_requests_with_multiple_info_requests
4.017s	clients/fdsn/tests/test_client.py::ClientTestCase::test_iris_example_queries_dataselect
3.852s	clients/syngine/tests/test_client.py::ClientTestCase::test_get_waveforms
3.680s	clients/fdsn/tests/test_client.py::ClientTestCase::test_iris_example_queries_dataselect_discover_services_false
2.986s	clients/fdsn/client.py::obspy.clients.fdsn.client.Client.get_waveforms_bulk
2.946s	clients/fdsn/client.py::obspy.clients.fdsn.client.Client.get_waveforms
2.692s	clients/fdsn/__init__.py::obspy.clients.fdsn
2.504s	clients/syngine/__init__.py::obspy.clients.syngine
2.262s	core/tests/test_stream.py::TestStream::test_read_url_via_network
2.058s	clients/earthworm/__init__.py::obspy.clients.earthworm
2.053s	clients/fdsn/tests/test_client.py::ClientTestCase::test_redirection_auth
1.969s	clients/fdsn/tests/test_client.py::ClientTestCase::test_redirection
1.898s	clients/fdsn/mass_downloader/__init__.py::obspy.clients.fdsn.mass_downloader
1.897s	clients/seedlink/basic_client.py::obspy.clients.seedlink.basic_client.Client.get_info

Warnings (1)

Stage	Filename	Category	Message
collect	/usr/share/miniconda3/envs/test/lib/python3.8/site-packages/obspy/clients/filesystem/db.py:18	MovedIn20Warning	Deprecated API features detected! These feature(s) are not compatible with SQLAlchemy 2.0. To prevent incompatible upgrades prior to updating applications, ensure requirements files are pinned to "sqlalchemy<2.0". Set environment variable SQLALCHEMY_WARN_20=1 to show all deprecation warnings. Set environment variable SQLALCHEMY_SILENCE_UBER_WARNING=1 to silence this message. (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9)