#134501 Report by node pegasus covering 2060 tests from 60 modules resulted into 9 errors

Report

ObsPy version
1.4.0
GitHub Pull Request
-
Report file
JSON document
Total runtime
81.8 sec
Report date/time
May 25, 2023, 4:41 a.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
pegasus
Processor
x86_64
Python Compiler
GCC 11.3.0
Python Implementation
CPython
Python Version
3.10.6
Release
5.19.0-42-generic
System
Linux
Version
#43~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Fri Apr 21 16:51:08 UTC 2

Dependencies

cartopy
---
decorator
4.4.2
flake8
---
geographiclib
---
lxml
4.8.0
matplotlib
3.5.1
numpy
1.21.5
obspy
1.4.0
pyproj
3.3.0
pytest
7.3.1
pytest-json-report
1.5.0
requests
2.25.1
scipy
1.8.0
setuptools
59.6.0
shapefile
---
sqlalchemy
2.0.15

Modules (60)

Module Errors / Failures Tracebacks
obspy.clients Not tested -
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem 9 1 2 3 4 5 6 7 8 9
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl - -
obspy.clients.seedlink Not tested -
obspy.clients.syngine Not tested -
obspy.core - -
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.alsep - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 9 9

Tracebacks (9)

055 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
056
057 * :meth:`~Client.get_availability_extent()`:
058 Returns a list of (network, station, location, channel, earliest, latest)
059 tuples that represent the full extent of available data. This example
060 retrieves from the very small obspy test tsindex database a list of all
061 available ("BHZ") channel extents from the Global Seismograph Network
062 ("IU") for all times.
063
064 >>> extents = client.get_availability_extent(network="IU", channel="BHZ")
UNEXPECTED EXCEPTION: ValueError('Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c063f040; network>, <sqlalchemy.sql.elements.Label at 0x7f18c067c280; station>, <sqlalchemy.sql.elements.Label at 0x7f18c067c340; location>, <sqlalchemy.sql.elements.Label at 0x7f18c067c5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c067c670; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c067c6d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c063f040; network>, <sqlalchemy.sql.elements.Label at 0x7f18c067c280; station>, <sqlalchemy.sql.elements.Label at 0x7f18c067c340; location>, <sqlalchemy.sql.elements.Label at 0x7f18c067c5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c067c670; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c067c6d0; endtime>)?')
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c063f040; network>, <sqlalchemy.sql.elements.Label at 0x7f18c067c280; station>, <sqlalchemy.sql.elements.Label at 0x7f18c067c340; location>, <sqlalchemy.sql.elements.Label at 0x7f18c067c5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c067c670; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c067c6d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c063f040; network>, <sqlalchemy.sql.elements.Label at 0x7f18c067c280; station>, <sqlalchemy.sql.elements.Label at 0x7f18c067c340; location>, <sqlalchemy.sql.elements.Label at 0x7f18c067c5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c067c670; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c067c6d0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.10/doctest.py", line 1350, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.clients.filesystem.tsindex[6]>", line 1, in <module>
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent
summary_rows = self._get_summary_rows(network, station,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c063f040; network>, <sqlalchemy.sql.elements.Label at 0x7f18c067c280; station>, <sqlalchemy.sql.elements.Label at 0x7f18c067c340; location>, <sqlalchemy.sql.elements.Label at 0x7f18c067c5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c067c670; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c067c6d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c063f040; network>, <sqlalchemy.sql.elements.Label at 0x7f18c067c280; station>, <sqlalchemy.sql.elements.Label at 0x7f18c067c340; location>, <sqlalchemy.sql.elements.Label at 0x7f18c067c5b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c067c670; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c067c6d0; endtime>)?
/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py:64: UnexpectedException
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c02fea40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff400; station>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc2e0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff580; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc040; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c02fce50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c02fea40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff400; station>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc2e0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff580; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc040; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c02fce50; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 380, in test_get_availability
actual_avail = client.get_availability(
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability
tsindex_rows = self._get_tsindex_rows(network, station,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows
return self.request_handler._fetch_index_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c02fea40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff400; station>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc2e0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff580; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc040; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c02fce50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c02fea40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff400; station>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc2e0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c02ff580; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c02fc040; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c02fce50; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c034eec0; network>, <sqlalchemy.sql.elements.Label at 0x7f18c034f0d0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c034c580; location>, <sqlalchemy.sql.elements.Label at 0x7f18c034e4a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c034e6b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c034ee30; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c034eec0; network>, <sqlalchemy.sql.elements.Label at 0x7f18c034f0d0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c034c580; location>, <sqlalchemy.sql.elements.Label at 0x7f18c034e4a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c034e6b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c034ee30; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 235, in test_get_availability_extent
actual_avail_extents = client.get_availability_extent(
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent
summary_rows = self._get_summary_rows(network, station,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c034eec0; network>, <sqlalchemy.sql.elements.Label at 0x7f18c034f0d0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c034c580; location>, <sqlalchemy.sql.elements.Label at 0x7f18c034e4a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c034e6b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c034ee30; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c034eec0; network>, <sqlalchemy.sql.elements.Label at 0x7f18c034f0d0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c034c580; location>, <sqlalchemy.sql.elements.Label at 0x7f18c034e4a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c034e6b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c034ee30; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0334d00; network>, <sqlalchemy.sql.elements.Label at 0x7f18c031bfd0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c031b520; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03184f0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0334d00; network>, <sqlalchemy.sql.elements.Label at 0x7f18c031bfd0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c031b520; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03184f0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 174, in test_get_nslc
actual_nslc = client.get_nslc("I*,CU",
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 317, in get_nslc
summary_rows = self._get_summary_rows(network, station, location,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0334d00; network>, <sqlalchemy.sql.elements.Label at 0x7f18c031bfd0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c031b520; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03184f0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0334d00; network>, <sqlalchemy.sql.elements.Label at 0x7f18c031bfd0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c031b520; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03184f0; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0337730; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0334820; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0334c10; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03372e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0336ef0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336e00; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0337730; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0334820; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0334c10; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03372e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0336ef0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336e00; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 61, in test_get_waveforms
returned_stream = client.get_waveforms(
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 262, in get_waveforms
return self._get_waveforms(query_rows, merge)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms
index_rows = self.request_handler._fetch_index_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0337730; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0334820; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0334c10; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03372e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0336ef0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336e00; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0337730; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0334820; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0334c10; location>, <sqlalchemy.sql.elements.Label at 0x7f18c03372e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0336ef0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336e00; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0357f70; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0357580; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0357df0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c0357520; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0356920; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0357e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0357f70; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0357580; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0357df0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c0357520; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0356920; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0357e50; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 141, in test_get_waveforms_bulk
returned_stream = client.get_waveforms_bulk(bulk_request)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 288, in get_waveforms_bulk
return self._get_waveforms(query_rows, merge)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms
index_rows = self.request_handler._fetch_index_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0357f70; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0357580; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0357df0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c0357520; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0356920; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0357e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0357f70; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0357580; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0357df0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c0357520; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c0356920; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0357e50; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0319300; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; station>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031b8e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336290; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0319300; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; station>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031b8e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336290; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 580, in test_has_data
self.assertTrue(client.has_data())
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 558, in has_data
avail_percentage = self.get_availability_percentage(network,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 494, in get_availability_percentage
avail = self.get_availability(network, station,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability
tsindex_rows = self._get_tsindex_rows(network, station,
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows
return self.request_handler._fetch_index_rows(query_rows)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0319300; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; station>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031b8e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336290; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0319300; network>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; station>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031b8e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c03189a0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c0336290; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c031bd60; network>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031a800; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c031b5b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c031bd60; network>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031a800; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c031b5b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 773, in test_build_file_list
self.assertRaisesRegex(OSError,
File "/usr/lib/python3.10/unittest/case.py", line 1291, in assertRaisesRegex
return context.handle('assertRaisesRegex', args, kwargs)
File "/usr/lib/python3.10/unittest/case.py", line 201, in handle
callable_obj(*args, **kwargs)
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1064, in build_file_list
tsindex = self.request_handler._fetch_index_rows()
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c031bd60; network>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031a800; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c031b5b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c031bd60; network>, <sqlalchemy.sql.elements.Label at 0x7f18c03184c0; station>, <sqlalchemy.sql.elements.Label at 0x7f18c0318670; location>, <sqlalchemy.sql.elements.Label at 0x7f18c031a800; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c031b5b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c03181c0; endtime>)?
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5139, in __init__
self._raw_columns = [
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/selectable.py", line 5140, in <listcomp>
coercions.expect(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 1142, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/local/lib/python3.10/dist-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0336d40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c035ca30; station>, <sqlalchemy.sql.elements.Label at 0x7f18c035fd60; location>, <sqlalchemy.sql.elements.Label at 0x7f18c035d1b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c035ce80; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c035d900; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0336d40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c035ca30; station>, <sqlalchemy.sql.elements.Label at 0x7f18c035fd60; location>, <sqlalchemy.sql.elements.Label at 0x7f18c035d1b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c035ce80; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c035d900; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 919, in test__fetch_summary_rows
ts_summary_data = request_handler._fetch_summary_rows(
File "/usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f18c0336d40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c035ca30; station>, <sqlalchemy.sql.elements.Label at 0x7f18c035fd60; location>, <sqlalchemy.sql.elements.Label at 0x7f18c035d1b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c035ce80; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c035d900; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f18c0336d40; network>, <sqlalchemy.sql.elements.Label at 0x7f18c035ca30; station>, <sqlalchemy.sql.elements.Label at 0x7f18c035fd60; location>, <sqlalchemy.sql.elements.Label at 0x7f18c035d1b0; channel>, <sqlalchemy.sql.elements.Label at 0x7f18c035ce80; starttime>, <sqlalchemy.sql.elements.Label at 0x7f18c035d900; endtime>)?

Skipped tests (40)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local Skipped: cartopy not installed
core core/tests/test_inventory.py::TestInventoryCartopy::test_combined_station_event_plot Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_global Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_ortho Skipped: cartopy not installed
core core/tests/test_network.py::TestNetworkCartopy::test_location_plot_local Skipped: cartopy not installed
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_with_geographiclib Skipped: Module geographiclib is not installed
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_issue_375 Skipped: Module geographiclib is not installed
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.gcf io/gcf/core.py::obspy.io.gcf.core._write_gcf Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_catalog_shapefile_with_extra_field Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_via_plugin Skipped: pyshp not installed
io.shapefile io/shapefile/tests/test_core.py::ShapefileTestCase::test_write_inventory_shapefile_with_extra_field Skipped: pyshp not installed
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
taup taup/tests/test_ray_paths.py::TestRayPathCalculations::test_compute_ray_paths Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_p_iasp91_geo_manual Skipped: Module geographiclib is not installed
taup taup/tests/test_tau.py::TestTauPyModel::test_pierce_p_iasp91_geo Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_single_path_geo_iasp91 Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_geo Skipped: Module geographiclib is not installed or too old.
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_resampling Skipped: Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime Test
2.621s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
2.213s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
2.089s taup/__init__.py::obspy.taup
1.875s taup/tests/test_tau.py::TestTauPyModel::test_regional_models
1.747s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
1.317s core/stream.py::obspy.core.stream.read
1.086s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
1.035s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_many_identically_named_phases
0.959s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
0.950s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale
0.820s io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
0.818s signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
0.763s core/tests/test_trace.py::TestTrace::test_remove_response_plot
0.724s signal/tests/test_tf_misfit.py::TestTfPlot::test_plot_tf_misfits
0.698s signal/tests/test_rotate.py::RotateTestCase::test_rotate2zne_against_lqt_different_combinations
0.692s taup/tests/test_taup_plotting.py::TestTauPyPlotting::test_spherical_many_phases
0.673s taup/tests/test_tau.py::TestTauPyModel::test_kennet_ak135_ttime_tables_p_deep
0.670s signal/tests/test_interpolation.py::TestInterpolation::test_plot_lanczos_window
0.638s taup/tests/test_tau.py::TestTauPyModel::test_high_slowness_crust
0.619s signal/tests/test_invsim.py::InvSimTestCase::test_evalresp_file_like_object

Warnings (7)

Stage Filename Category Message
collect /usr/local/lib/python3.10/dist-packages/obspy/clients/filesystem/db.py:18 MovedIn20Warning The ``declarative_base()`` function is now available as sqlalchemy.orm.declarative_base(). (deprecated since: 2.0) (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9)
config /usr/lib/python3/dist-packages/pkg_resources/__init__.py:116 PkgResourcesDeprecationWarning 0.1.43ubuntu1 is an invalid version and will not be supported in a future release
config /usr/local/lib/python3.10/dist-packages/_pytest/cacheprovider.py:433 PytestCacheWarning could not create cache path /usr/local/lib/python3.10/dist-packages/obspy/.pytest_cache/v/cache/nodeids
config /usr/lib/python3/dist-packages/pkg_resources/_vendor/packaging/version.py:111 DeprecationWarning Creating a LegacyVersion has been deprecated and will be removed in the next major release
config /usr/local/lib/python3.10/dist-packages/_pytest/cacheprovider.py:387 PytestCacheWarning could not create cache path /usr/local/lib/python3.10/dist-packages/obspy/.pytest_cache/v/cache/lastfailed
config /usr/local/lib/python3.10/dist-packages/_pytest/stepwise.py:56 PytestCacheWarning could not create cache path /usr/local/lib/python3.10/dist-packages/obspy/.pytest_cache/v/cache/stepwise
config /usr/lib/python3/dist-packages/pkg_resources/__init__.py:116 PkgResourcesDeprecationWarning 1.1build1 is an invalid version and will not be supported in a future release