#135035 Report by node user covering 2060 tests from 59 modules resulted into 3 errors

Report

ObsPy version
1.4.0
GitHub Pull Request
-
Report file
JSON document
Total runtime
70.7 sec
Report date/time
July 31, 2023, 2:53 a.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
user
Processor
x86_64
Python Compiler
GCC 12.2.0
Python Implementation
CPython
Python Version
3.11.4
Release
5.15.0-43-generic
System
Linux
Version
#46-Ubuntu SMP Tue Jul 12 10:30:17 UTC 2022

Dependencies

cartopy
0.21.1
decorator
5.1.1
flake8
---
geographiclib
---
lxml
4.9.3
matplotlib
3.7.2
numpy
1.25.1
obspy
1.4.0
pyproj
3.6.0
pytest
7.4.0
pytest-json-report
1.5.0
requests
2.31.0
scipy
1.11.1
setuptools
68.0.0
shapefile
---
sqlalchemy
1.4.49

Modules (59)

Module Errors / Failures Tracebacks
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem - -
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl - -
obspy.clients.seedlink Not tested -
obspy.clients.syngine Not tested -
obspy.core 3 1 2 3
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.alsep - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 3 3

Tracebacks (3)

1 core 

Traceback (most recent call last):
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 155, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_result.py", line 108, in get_result
raise exc.with_traceback(exc.__traceback__)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 116, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/core/tests/test_event.py", line 120, in test_plot_farfield_without_quiver_with_maps
ev.plot(kind=[['global'], ['ortho', 'beachball'],
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/core/event/event.py", line 262, in plot
ax.stock_img()
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/mpl/geoaxes.py", line 1019, in stock_img
return self.imshow(imread(fname), origin='upper',
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/mpl/geoaxes.py", line 318, in wrapper
return func(self, *args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/mpl/geoaxes.py", line 1331, in imshow
img, extent = warp_array(img,
^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/img_transform.py", line 192, in warp_array
array = regrid(array, source_native_xy[0], source_native_xy[1],
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/img_transform.py", line 278, in regrid
_, indices = kdtree.query(target_xyz, k=1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "_ckdtree.pyx", line 795, in scipy.spatial._ckdtree.cKDTree.query
ValueError: 'x' must be finite, check for nan or inf values

2 core 

Traceback (most recent call last):
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 155, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_result.py", line 108, in get_result
raise exc.with_traceback(exc.__traceback__)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 116, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/core/tests/test_trace.py", line 1360, in test_taper_onesided
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x7f422f853f10>, <warnings.WarningMessage object at 0x7f42307e0c50>])

3 core 

Traceback (most recent call last):
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 155, in _multicall
return outcome.get_result()
^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_result.py", line 108, in get_result
raise exc.with_traceback(exc.__traceback__)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 116, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/core/tests/test_trace.py", line 1390, in test_taper_length
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x7f4230f89590>, <warnings.WarningMessage object at 0x7f4230f8b210>])

Skipped tests (27)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_with_geographiclib Skipped: Module geographiclib is not installed
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_issue_375 Skipped: Module geographiclib is not installed
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.gcf io/gcf/core.py::obspy.io.gcf.core._write_gcf Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
signal signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation Skipped: Test requires the jsonschema module
taup taup/tests/test_ray_paths.py::TestRayPathCalculations::test_compute_ray_paths Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_p_iasp91_geo_manual Skipped: Module geographiclib is not installed
taup taup/tests/test_tau.py::TestTauPyModel::test_pierce_p_iasp91_geo Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_tau.py::TestTauPyModel::test_single_path_geo_iasp91 Skipped: test needs geographiclib >= 1.34
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_geo Skipped: Module geographiclib is not installed or too old.
taup taup/tests/test_taup_geo.py::TestTaupGeo::test_path_resampling Skipped: Module geographiclib is not installed or too old.

Slowest tests (20)

Runtime Test
9.401s core/stream.py::obspy.core.stream.read
2.860s io/nlloc/tests/test_util.py::NLLOCTestCase::test_read_nlloc_scatter_coordinate_conversion
1.662s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
1.530s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
1.452s taup/__init__.py::obspy.taup
1.418s signal/tf_misfit.py::obspy.signal.tf_misfit.plot_tfr
1.339s taup/tests/test_tau.py::TestTauPyModel::test_regional_models
1.190s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
0.887s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
0.747s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_many_identically_named_phases
0.740s core/tests/test_waveform_plugins.py::TestWaveformPlugins::test_read_thread_safe
0.674s signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
0.673s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
0.631s io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
0.602s core/tests/test_trace.py::TestTrace::test_remove_response_plot
0.539s taup/tests/test_taup_plotting.py::TestTauPyPlotting::test_spherical_many_phases
0.529s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_tiny
0.512s signal/tests/test_tf_misfit.py::TestTfPlot::test_plot_tf_gofs
0.503s signal/tests/test_interpolation.py::TestInterpolation::test_plot_lanczos_window
0.481s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale

Warnings (41)

Stage Filename Category Message
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/core/trace.py:2174 DeprecationWarning Importing hann from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hann' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/imaging/scripts/mopad.py:840 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:420 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/crs.py:827 DeprecationWarning The 'geom_factory' function is deprecated in Shapely 2.0, and will be removed in a future version
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:265 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/imaging/scripts/scan.py:437 UserWarning The figure layout has changed to tight
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tests/test_polarization.py:62 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/io/sac/tests/test_sactrace.py:187 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
collect /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/clients/filesystem/db.py:18 MovedIn20Warning Deprecated API features detected! These feature(s) are not compatible with SQLAlchemy 2.0. To prevent incompatible upgrades prior to updating applications, ensure requirements files are pinned to "sqlalchemy<2.0". Set environment variable SQLALCHEMY_WARN_20=1 to show all deprecation warnings. Set environment variable SQLALCHEMY_SILENCE_UBER_WARNING=1 to silence this message. (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:245 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tests/test_freqattributes.py:88 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tf_misfit.py:1344 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:419 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/seismic_phase.py:1645 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:301 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:391 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/io/mseed/tests/test_mseed_util.py:75 DeprecationWarning NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 128 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype) will give the desired result (the cast overflows).
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/taup_geo.py:91 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/pyproj/transformer.py:820 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:285 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:286 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tests/test_polarization.py:64 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:244 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/io/sac/sactrace.py:1543 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:243 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:300 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:389 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:299 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tf_misfit.py:1084 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:284 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:390 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tests/test_cpxtrace.py:85 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:418 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tests/test_hoctavbands.py:87 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/_pytest/python.py:194 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:264 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/signal/tests/test_polarization.py:60 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/slowness_model.py:1818 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/tau_branch.py:263 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/cartopy/crs.py:814 DeprecationWarning The 'geom_factory' function is deprecated in Shapely 2.0, and will be removed in a future version
runtest /home/user/anaconda3/envs/obspy/lib/python3.11/site-packages/obspy/taup/seismic_phase.py:1618 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)