#135073 Report by node gh-actions covering 2060 tests from 59 modules resulted into 11 errors

Report

ObsPy version
1.4.0
GitHub Pull Request
https://github.com/obspy/obspy/pull/3339
Report file
JSON document
Total runtime
217.4 sec
Report date/time
Aug. 9, 2023, 5:32 p.m.

System / Python

Architecture
64bit
Machine
x86_64
Node
gh-actions
Processor
x86_64
Python Compiler
GCC 11.3.0
Python Implementation
CPython
Python Version
3.9.16
Release
5.15.0-1042-azure
System
Linux
Version
#49-Ubuntu SMP Tue Jul 11 17:28:46 UTC 2023

Dependencies

cartopy
0.22.0
decorator
5.1.1
flake8
---
geographiclib
2.0
lxml
4.9.3
matplotlib
3.7.2
numpy
1.25.2
obspy
1.4.0
pyproj
3.6.0
pytest
7.4.0
pytest-json-report
1.5.0
requests
2.31.0
scipy
1.11.1
setuptools
68.0.0
shapefile
---
sqlalchemy
2.0.19

Modules (59)

Module Errors / Failures Tracebacks
obspy.clients.earthworm Not tested -
obspy.clients.fdsn - -
obspy.clients.filesystem 9 1 2 3 4 5 6 7 8 9
obspy.clients.iris Not tested -
obspy.clients.neic Not tested -
obspy.clients.nrl - -
obspy.clients.seedlink Not tested -
obspy.clients.syngine Not tested -
obspy.core 2 10 11
obspy.core.event - -
obspy.core.inventory - -
obspy.core.util - -
obspy.geodetics - -
obspy.imaging - -
obspy.io.ah - -
obspy.io.alsep - -
obspy.io.arclink - -
obspy.io.ascii - -
obspy.io.cmtsolution - -
obspy.io.cnv - -
obspy.io.css - -
obspy.io.dmx - -
obspy.io.focmec - -
obspy.io.gcf - -
obspy.io.gse2 - -
obspy.io.hypodd - -
obspy.io.iaspei - -
obspy.io.json - -
obspy.io.kinemetrics - -
obspy.io.kml - -
obspy.io.mseed - -
obspy.io.ndk - -
obspy.io.nied - -
obspy.io.nlloc - -
obspy.io.nordic - -
obspy.io.pdas - -
obspy.io.pde - -
obspy.io.quakeml - -
obspy.io.reftek - -
obspy.io.rg16 - -
obspy.io.sac - -
obspy.io.scardec - -
obspy.io.seg2 - -
obspy.io.segy - -
obspy.io.seisan - -
obspy.io.seiscomp - -
obspy.io.sh - -
obspy.io.shapefile - -
obspy.io.stationtxt - -
obspy.io.stationxml - -
obspy.io.wav - -
obspy.io.win - -
obspy.io.xseed - -
obspy.io.y - -
obspy.io.zmap - -
obspy.realtime - -
obspy.scripts - -
obspy.signal - -
obspy.taup - -
Summary 11 11

Tracebacks (11)

055 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
056
057 * :meth:`~Client.get_availability_extent()`:
058 Returns a list of (network, station, location, channel, earliest, latest)
059 tuples that represent the full extent of available data. This example
060 retrieves from the very small obspy test tsindex database a list of all
061 available ("BHZ") channel extents from the Global Seismograph Network
062 ("IU") for all times.
063
064 >>> extents = client.get_availability_extent(network="IU", channel="BHZ")
UNEXPECTED EXCEPTION: ValueError('Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48355025b0; network>, <sqlalchemy.sql.elements.Label at 0x7f4835502a00; station>, <sqlalchemy.sql.elements.Label at 0x7f4835502a60; location>, <sqlalchemy.sql.elements.Label at 0x7f4835502d90; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835502df0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835502e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48355025b0; network>, <sqlalchemy.sql.elements.Label at 0x7f4835502a00; station>, <sqlalchemy.sql.elements.Label at 0x7f4835502a60; location>, <sqlalchemy.sql.elements.Label at 0x7f4835502d90; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835502df0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835502e50; endtime>)?')
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48355025b0; network>, <sqlalchemy.sql.elements.Label at 0x7f4835502a00; station>, <sqlalchemy.sql.elements.Label at 0x7f4835502a60; location>, <sqlalchemy.sql.elements.Label at 0x7f4835502d90; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835502df0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835502e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48355025b0; network>, <sqlalchemy.sql.elements.Label at 0x7f4835502a00; station>, <sqlalchemy.sql.elements.Label at 0x7f4835502a60; location>, <sqlalchemy.sql.elements.Label at 0x7f4835502d90; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835502df0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835502e50; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/doctest.py", line 1334, in __run
exec(compile(example.source, filename, "single",
File "<doctest obspy.clients.filesystem.tsindex[6]>", line 1, in <module>
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent
summary_rows = self._get_summary_rows(network, station,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48355025b0; network>, <sqlalchemy.sql.elements.Label at 0x7f4835502a00; station>, <sqlalchemy.sql.elements.Label at 0x7f4835502a60; location>, <sqlalchemy.sql.elements.Label at 0x7f4835502d90; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835502df0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835502e50; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48355025b0; network>, <sqlalchemy.sql.elements.Label at 0x7f4835502a00; station>, <sqlalchemy.sql.elements.Label at 0x7f4835502a60; location>, <sqlalchemy.sql.elements.Label at 0x7f4835502d90; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835502df0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835502e50; endtime>)?
/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py:64: UnexpectedException
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f483542a6a0; network>, <sqlalchemy.sql.elements.Label at 0x7f483542a160; station>, <sqlalchemy.sql.elements.Label at 0x7f483542a310; location>, <sqlalchemy.sql.elements.Label at 0x7f483542aa60; channel>, <sqlalchemy.sql.elements.Label at 0x7f483542a820; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483542aac0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f483542a6a0; network>, <sqlalchemy.sql.elements.Label at 0x7f483542a160; station>, <sqlalchemy.sql.elements.Label at 0x7f483542a310; location>, <sqlalchemy.sql.elements.Label at 0x7f483542aa60; channel>, <sqlalchemy.sql.elements.Label at 0x7f483542a820; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483542aac0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 380, in test_get_availability
actual_avail = client.get_availability(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability
tsindex_rows = self._get_tsindex_rows(network, station,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows
return self.request_handler._fetch_index_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f483542a6a0; network>, <sqlalchemy.sql.elements.Label at 0x7f483542a160; station>, <sqlalchemy.sql.elements.Label at 0x7f483542a310; location>, <sqlalchemy.sql.elements.Label at 0x7f483542aa60; channel>, <sqlalchemy.sql.elements.Label at 0x7f483542a820; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483542aac0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f483542a6a0; network>, <sqlalchemy.sql.elements.Label at 0x7f483542a160; station>, <sqlalchemy.sql.elements.Label at 0x7f483542a310; location>, <sqlalchemy.sql.elements.Label at 0x7f483542aa60; channel>, <sqlalchemy.sql.elements.Label at 0x7f483542a820; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483542aac0; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f483552c790; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c520; station>, <sqlalchemy.sql.elements.Label at 0x7f483552c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7f48353b82e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48353b81f0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48353b86d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f483552c790; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c520; station>, <sqlalchemy.sql.elements.Label at 0x7f483552c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7f48353b82e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48353b81f0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48353b86d0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 235, in test_get_availability_extent
actual_avail_extents = client.get_availability_extent(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 358, in get_availability_extent
summary_rows = self._get_summary_rows(network, station,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f483552c790; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c520; station>, <sqlalchemy.sql.elements.Label at 0x7f483552c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7f48353b82e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48353b81f0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48353b86d0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f483552c790; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c520; station>, <sqlalchemy.sql.elements.Label at 0x7f483552c4c0; location>, <sqlalchemy.sql.elements.Label at 0x7f48353b82e0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48353b81f0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48353b86d0; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48352afc40; network>, <sqlalchemy.sql.elements.Label at 0x7f48352dc6a0; station>, <sqlalchemy.sql.elements.Label at 0x7f48352dcbb0; location>, <sqlalchemy.sql.elements.Label at 0x7f4835317250; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835317730; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835317820; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48352afc40; network>, <sqlalchemy.sql.elements.Label at 0x7f48352dc6a0; station>, <sqlalchemy.sql.elements.Label at 0x7f48352dcbb0; location>, <sqlalchemy.sql.elements.Label at 0x7f4835317250; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835317730; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835317820; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 174, in test_get_nslc
actual_nslc = client.get_nslc("I*,CU",
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 317, in get_nslc
summary_rows = self._get_summary_rows(network, station, location,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 597, in _get_summary_rows
return self.request_handler._fetch_summary_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48352afc40; network>, <sqlalchemy.sql.elements.Label at 0x7f48352dc6a0; station>, <sqlalchemy.sql.elements.Label at 0x7f48352dcbb0; location>, <sqlalchemy.sql.elements.Label at 0x7f4835317250; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835317730; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835317820; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48352afc40; network>, <sqlalchemy.sql.elements.Label at 0x7f48352dc6a0; station>, <sqlalchemy.sql.elements.Label at 0x7f48352dcbb0; location>, <sqlalchemy.sql.elements.Label at 0x7f4835317250; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835317730; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835317820; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48352af550; network>, <sqlalchemy.sql.elements.Label at 0x7f48352af430; station>, <sqlalchemy.sql.elements.Label at 0x7f48352af5e0; location>, <sqlalchemy.sql.elements.Label at 0x7f48352af6a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48352afd30; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48352afcd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48352af550; network>, <sqlalchemy.sql.elements.Label at 0x7f48352af430; station>, <sqlalchemy.sql.elements.Label at 0x7f48352af5e0; location>, <sqlalchemy.sql.elements.Label at 0x7f48352af6a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48352afd30; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48352afcd0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 61, in test_get_waveforms
returned_stream = client.get_waveforms(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 262, in get_waveforms
return self._get_waveforms(query_rows, merge)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms
index_rows = self.request_handler._fetch_index_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48352af550; network>, <sqlalchemy.sql.elements.Label at 0x7f48352af430; station>, <sqlalchemy.sql.elements.Label at 0x7f48352af5e0; location>, <sqlalchemy.sql.elements.Label at 0x7f48352af6a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48352afd30; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48352afcd0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48352af550; network>, <sqlalchemy.sql.elements.Label at 0x7f48352af430; station>, <sqlalchemy.sql.elements.Label at 0x7f48352af5e0; location>, <sqlalchemy.sql.elements.Label at 0x7f48352af6a0; channel>, <sqlalchemy.sql.elements.Label at 0x7f48352afd30; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48352afcd0; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f4835314d60; network>, <sqlalchemy.sql.elements.Label at 0x7f4835429e80; station>, <sqlalchemy.sql.elements.Label at 0x7f48354293d0; location>, <sqlalchemy.sql.elements.Label at 0x7f483531cf70; channel>, <sqlalchemy.sql.elements.Label at 0x7f483531c2b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483531c130; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f4835314d60; network>, <sqlalchemy.sql.elements.Label at 0x7f4835429e80; station>, <sqlalchemy.sql.elements.Label at 0x7f48354293d0; location>, <sqlalchemy.sql.elements.Label at 0x7f483531cf70; channel>, <sqlalchemy.sql.elements.Label at 0x7f483531c2b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483531c130; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 141, in test_get_waveforms_bulk
returned_stream = client.get_waveforms_bulk(bulk_request)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 288, in get_waveforms_bulk
return self._get_waveforms(query_rows, merge)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 623, in _get_waveforms
index_rows = self.request_handler._fetch_index_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f4835314d60; network>, <sqlalchemy.sql.elements.Label at 0x7f4835429e80; station>, <sqlalchemy.sql.elements.Label at 0x7f48354293d0; location>, <sqlalchemy.sql.elements.Label at 0x7f483531cf70; channel>, <sqlalchemy.sql.elements.Label at 0x7f483531c2b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483531c130; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f4835314d60; network>, <sqlalchemy.sql.elements.Label at 0x7f4835429e80; station>, <sqlalchemy.sql.elements.Label at 0x7f48354293d0; location>, <sqlalchemy.sql.elements.Label at 0x7f483531cf70; channel>, <sqlalchemy.sql.elements.Label at 0x7f483531c2b0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f483531c130; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f4835319970; network>, <sqlalchemy.sql.elements.Label at 0x7f48353197f0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835319a00; location>, <sqlalchemy.sql.elements.Label at 0x7f4835319eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835319490; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835319f40; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f4835319970; network>, <sqlalchemy.sql.elements.Label at 0x7f48353197f0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835319a00; location>, <sqlalchemy.sql.elements.Label at 0x7f4835319eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835319490; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835319f40; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 580, in test_has_data
self.assertTrue(client.has_data())
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 558, in has_data
avail_percentage = self.get_availability_percentage(network,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 494, in get_availability_percentage
avail = self.get_availability(network, station,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 415, in get_availability
tsindex_rows = self._get_tsindex_rows(network, station,
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 679, in _get_tsindex_rows
return self.request_handler._fetch_index_rows(query_rows)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f4835319970; network>, <sqlalchemy.sql.elements.Label at 0x7f48353197f0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835319a00; location>, <sqlalchemy.sql.elements.Label at 0x7f4835319eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835319490; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835319f40; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f4835319970; network>, <sqlalchemy.sql.elements.Label at 0x7f48353197f0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835319a00; location>, <sqlalchemy.sql.elements.Label at 0x7f4835319eb0; channel>, <sqlalchemy.sql.elements.Label at 0x7f4835319490; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835319f40; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1546, in _fetch_index_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1547, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f4835314340; network>, <sqlalchemy.sql.elements.Label at 0x7f48353146a0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835420580; location>, <sqlalchemy.sql.elements.Label at 0x7f4835420f10; channel>, <sqlalchemy.sql.elements.Label at 0x7f48354207c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48354205b0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f4835314340; network>, <sqlalchemy.sql.elements.Label at 0x7f48353146a0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835420580; location>, <sqlalchemy.sql.elements.Label at 0x7f4835420f10; channel>, <sqlalchemy.sql.elements.Label at 0x7f48354207c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48354205b0; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 773, in test_build_file_list
self.assertRaisesRegex(OSError,
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 1282, in assertRaisesRegex
return context.handle('assertRaisesRegex', args, kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 201, in handle
callable_obj(*args, **kwargs)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1064, in build_file_list
tsindex = self.request_handler._fetch_index_rows()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1668, in _fetch_index_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f4835314340; network>, <sqlalchemy.sql.elements.Label at 0x7f48353146a0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835420580; location>, <sqlalchemy.sql.elements.Label at 0x7f4835420f10; channel>, <sqlalchemy.sql.elements.Label at 0x7f48354207c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48354205b0; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f4835314340; network>, <sqlalchemy.sql.elements.Label at 0x7f48353146a0; station>, <sqlalchemy.sql.elements.Label at 0x7f4835420580; location>, <sqlalchemy.sql.elements.Label at 0x7f4835420f10; channel>, <sqlalchemy.sql.elements.Label at 0x7f48354207c0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f48354205b0; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1726, in _fetch_summary_rows
stmts = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1727, in <listcomp>
sa.select([
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/_selectable_constructors.py", line 489, in select
return Select(*entities)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5130, in __init__
self._raw_columns = [
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/selectable.py", line 5131, in <listcomp>
coercions.expect(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 413, in expect
resolved = impl._literal_coercion(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 651, in _literal_coercion
self._raise_for_expected(element, argname)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 1139, in _raise_for_expected
return super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 710, in _raise_for_expected
super()._raise_for_expected(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/sqlalchemy/sql/coercions.py", line 535, in _raise_for_expected
raise exc.ArgumentError(msg, code=code) from err
sqlalchemy.exc.ArgumentError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48352f1af0; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c0a0; station>, <sqlalchemy.sql.elements.Label at 0x7f483552cd60; location>, <sqlalchemy.sql.elements.Label at 0x7f483552cb20; channel>, <sqlalchemy.sql.elements.Label at 0x7f483552c6d0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835429a90; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48352f1af0; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c0a0; station>, <sqlalchemy.sql.elements.Label at 0x7f483552cd60; location>, <sqlalchemy.sql.elements.Label at 0x7f483552cb20; channel>, <sqlalchemy.sql.elements.Label at 0x7f483552c6d0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835429a90; endtime>)?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 59, in testPartExecutor
yield
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 592, in run
self._callTestMethod(testMethod)
File "/usr/share/miniconda3/envs/test/lib/python3.9/unittest/case.py", line 550, in _callTestMethod
method()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tests/test_tsindex.py", line 919, in test__fetch_summary_rows
ts_summary_data = request_handler._fetch_summary_rows(
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/tsindex.py", line 1744, in _fetch_summary_rows
raise ValueError(str(err))
ValueError: Column expression, FROM clause, or other columns clause element expected, got [<sqlalchemy.sql.elements.Label at 0x7f48352f1af0; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c0a0; station>, <sqlalchemy.sql.elements.Label at 0x7f483552cd60; location>, <sqlalchemy.sql.elements.Label at 0x7f483552cb20; channel>, <sqlalchemy.sql.elements.Label at 0x7f483552c6d0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835429a90; endtime>]. Did you mean to say select(<sqlalchemy.sql.elements.Label at 0x7f48352f1af0; network>, <sqlalchemy.sql.elements.Label at 0x7f483552c0a0; station>, <sqlalchemy.sql.elements.Label at 0x7f483552cd60; location>, <sqlalchemy.sql.elements.Label at 0x7f483552cb20; channel>, <sqlalchemy.sql.elements.Label at 0x7f483552c6d0; starttime>, <sqlalchemy.sql.elements.Label at 0x7f4835429a90; endtime>)?
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 155, in _multicall
return outcome.get_result()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_result.py", line 108, in get_result
raise exc.with_traceback(exc.__traceback__)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 116, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/core/tests/test_trace.py", line 1360, in test_taper_onesided
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x7f482cc88280>, <warnings.WarningMessage object at 0x7f482cc88790>])
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 341, in from_call
result: Optional[TResult] = func()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 262, in <lambda>
lambda: ihook(item=item, **kwds), when=when, reraise=reraise
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 155, in _multicall
return outcome.get_result()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_result.py", line 108, in get_result
raise exc.with_traceback(exc.__traceback__)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 177, in pytest_runtest_call
raise e
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/runner.py", line 169, in pytest_runtest_call
item.runtest()
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 1788, in runtest
self.ihook.pytest_pyfunc_call(pyfuncitem=self)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_hooks.py", line 433, in __call__
return self._hookexec(self.name, self._hookimpls, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_manager.py", line 112, in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 116, in _multicall
raise exception.with_traceback(exception.__traceback__)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/pluggy/_callers.py", line 80, in _multicall
res = hook_impl.function(*args)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py", line 194, in pytest_pyfunc_call
result = testfunction(**testargs)
File "/usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/core/tests/test_trace.py", line 1390, in test_taper_length
assert len(w) == 1
AssertionError: assert 2 == 1
+ where 2 = len([<warnings.WarningMessage object at 0x7f482cf68c40>, <warnings.WarningMessage object at 0x7f482cf687f0>])

Skipped tests (20)

Submodule Test Skip message
core core/stream.py::obspy.core.stream._is_pickle Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.CatchOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.SuppressOutput Skipped: all tests skipped by +SKIP option
core.util core/util/misc.py::obspy.core.util.misc.TemporaryWorkingDirectory Skipped: all tests skipped by +SKIP option
geodetics geodetics/tests/test_util_geodetics.py::TestUtilGeodetics::test_gps_2_dist_azimuth_bug150 Skipped: Geographiclib installed, not using calc_vincenty_inverse
imaging imaging/tests/test_mopad_script.py::TestMopad::test_script_plot Skipped: Currently broken until further review.
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_slist Skipped: all tests skipped by +SKIP option
io.ascii io/ascii/core.py::obspy.io.ascii.core._is_tspair Skipped: all tests skipped by +SKIP option
io.gcf io/gcf/core.py::obspy.io.gcf.core._write_gcf Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._evmagtonor Skipped: all tests skipped by +SKIP option
io.nordic io/nordic/utils.py::obspy.io.nordic.utils._nortoevmag Skipped: all tests skipped by +SKIP option
io.pde io/pde/mchedr.py::obspy.io.pde.mchedr._is_mchedr Skipped: all tests skipped by +SKIP option
io.quakeml io/quakeml/core.py::obspy.io.quakeml.core._is_quakeml Skipped: all tests skipped by +SKIP option
io.seisan io/seisan/core.py::obspy.io.seisan.core._is_seisan Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_asc Skipped: all tests skipped by +SKIP option
io.sh io/sh/core.py::obspy.io.sh.core._is_q Skipped: all tests skipped by +SKIP option
io.wav io/wav/core.py::obspy.io.wav.core._is_wav Skipped: all tests skipped by +SKIP option
io.y io/y/core.py::obspy.io.y.core._is_y Skipped: all tests skipped by +SKIP option
signal signal/quality_control.py::obspy.signal.quality_control.MSEEDMetadata Skipped: all tests skipped by +SKIP option
signal signal/tests/test_quality_control.py::QualityControlTestCase::test_schema_validation Skipped: Test requires the jsonschema module

Slowest tests (20)

Runtime Test
9.996s io/xseed/tests/test_core.py::CoreTestCase::test_response_calculation_from_seed_and_xseed
7.052s core/tests/test_event.py::TestEvent::test_plot_farfield_without_quiver_with_maps
4.983s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_shoot_existing_ray_param
4.633s taup/__init__.py::obspy.taup
3.988s taup/tests/test_tau.py::TestTauPyModel::test_regional_models
3.448s core/stream.py::obspy.core.stream.read
2.971s core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_local
2.921s signal/tests/test_calibration.py::CalibrationTestCase::test_relcal_different_overlaps
2.559s io/arclink/tests/test_inventory_xml.py::ArclinkInventoryTestCase::test_auto_read_arclink_xml
2.530s signal/tests/test_cross_correlation.py::TestCrossCorrelation::test_correlate_stream_template_and_correlation_detector
2.467s taup/tests/test_tau.py::TestTauPyModel::test_vs_java_iasp91
2.303s core/tests/test_inventory.py::TestInventoryCartopy::test_location_plot_global
2.169s signal/tests/test_spectral_estimation.py::TestPsd::test_ppsd_restricted_stacks
2.151s taup/tests/test_velocity_model.py::TestTauPyVelocityModel::test_read_velocity_model
2.016s taup/tests/test_seismic_phase.py::TestTauPySeismicPhase::test_many_identically_named_phases
1.998s core/tests/test_trace.py::TestTrace::test_remove_response_plot
1.778s signal/tests/test_polarization.py::PolarizationTestCase::test_polarization_vidale
1.752s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces
1.586s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_huge
1.580s imaging/tests/test_waveform.py::TestWaveformPlot::test_plot_multiple_traces_10_traces_tiny

Warnings (36)

Stage Filename Category Message
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/seismic_phase.py:1645 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:389 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/slowness_model.py:1818 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/imaging/scripts/mopad.py:840 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/io/mseed/tests/test_mseed_util.py:75 DeprecationWarning NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 128 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype) will give the desired result (the cast overflows).
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tf_misfit.py:1084 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tf_misfit.py:1344 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_polarization.py:64 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/_pytest/python.py:194 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:301 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:263 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/core/trace.py:2174 DeprecationWarning Importing hann from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hann' or the convenience function 'scipy.signal.get_window' instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/seismic_phase.py:1618 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/taup_geo.py:91 DeprecationWarning `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:390 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_cpxtrace.py:85 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_polarization.py:60 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:299 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:391 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/imaging/scripts/scan.py:437 UserWarning The figure layout has changed to tight
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:285 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:265 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:244 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:420 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_freqattributes.py:88 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:245 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
collect /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/clients/filesystem/db.py:18 MovedIn20Warning The ``declarative_base()`` function is now available as sqlalchemy.orm.declarative_base(). (deprecated since: 2.0) (Background on SQLAlchemy 2.0 at: https://sqlalche.me/e/b8d9)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:300 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:286 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:284 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:419 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:418 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:264 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/taup/tau_branch.py:243 DeprecationWarning Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_polarization.py:62 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.
runtest /usr/share/miniconda3/envs/test/lib/python3.9/site-packages/obspy/signal/tests/test_hoctavbands.py:87 DeprecationWarning Importing hamming from 'scipy.signal' is deprecated and will raise an error in SciPy 1.13.0. Please use 'scipy.signal.windows.hamming' or the convenience function 'scipy.signal.get_window' instead.